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  <front>
    <journal-meta><journal-id journal-id-type="publisher">ASCMO</journal-id><journal-title-group>
    <journal-title>Advances in Statistical Climatology, Meteorology and Oceanography</journal-title>
    <abbrev-journal-title abbrev-type="publisher">ASCMO</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Adv. Stat. Clim. Meteorol. Oceanogr.</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">2364-3587</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/ascmo-10-69-2024</article-id><title-group><article-title>Spatiotemporal methods for estimating subsurface ocean thermal response to tropical cyclones</article-title><alt-title>Spatiotemporal methods for TC–ocean response estimation</alt-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff4">
          <name><surname>Hu</surname><given-names>Addison J.</given-names></name>
          <email>mail@huisaddison.com</email>
        <ext-link>https://orcid.org/0000-0002-9339-7291</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Kuusela</surname><given-names>Mikael</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff4">
          <name><surname>Lee</surname><given-names>Ann B.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Giglio</surname><given-names>Donata</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3738-4293</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Wood</surname><given-names>Kimberly M.</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Department of Statistics &amp; Data Science, Carnegie Mellon University, Pittsburgh, PA, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Department of Atmospheric and Oceanic Sciences, University of Colorado Boulder,  Boulder, CO, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Department of Hydrology and Atmospheric Sciences, University of Arizona, Tucson, AZ, USA</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Machine Learning Department, Carnegie Mellon University,  Pittsburgh, PA, USA </institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Addison J. Hu (mail@huisaddison.com)</corresp></author-notes><pub-date><day>22</day><month>July</month><year>2024</year></pub-date>
      
      <volume>10</volume>
      <issue>2</issue>
      <fpage>69</fpage><lpage>93</lpage>
      <history>
        <date date-type="received"><day>18</day><month>November</month><year>2023</year></date>
           <date date-type="rev-recd"><day>9</day><month>March</month><year>2024</year></date>
           <date date-type="accepted"><day>22</day><month>March</month><year>2024</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2024 Addison J. Hu et al.</copyright-statement>
        <copyright-year>2024</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024.html">This article is available from https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024.html</self-uri><self-uri xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024.pdf">The full text article is available as a PDF file from https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d1e134">Tropical cyclones (TCs), driven by heat exchange between the air and sea, pose a substantial risk to many communities around the world.  Accurate characterization of the subsurface ocean thermal response to TC passage is crucial for accurate TC intensity forecasts and an understanding of the role that TCs play in the global climate system. However, that characterization is complicated by the high-noise ocean environment, correlations inherent in spatiotemporal data, relative scarcity of in situ observations, and the entanglement of the TC-induced signal with seasonal signals. We present a general methodological framework that addresses these difficulties, integrating existing techniques in seasonal mean field estimation, Gaussian process modeling, and nonparametric regression into an ANOVA decomposition model. Importantly, we improve upon past work by properly handling seasonality, providing rigorous uncertainty quantification, and treating time as a continuous variable, rather than producing estimates that are binned in time. This ANOVA model is estimated using in situ subsurface temperature profiles from the Argo fleet of autonomous floats through a multistep procedure, which (1) characterizes the upper-ocean seasonal shift during the TC season, (2) models the variability in the temperature observations, and (3) fits a thin-plate spline using the variability estimates to account for heteroskedasticity and correlation between the observations.  This spline fit reveals the ocean thermal response to the TC passage.  Through this framework, we obtain new scientific insights into the interaction between TCs and the ocean on a global scale, including a three-dimensional characterization of the near-surface and subsurface cooling along the TC storm track and the mixing-induced subsurface warming on the track's right side.</p>
  </abstract>
    
<funding-group>
<award-group id="gs1">
<funding-source>National Science Foundation Graduate Research Fellowship Program</funding-source>
<award-id>DGE175016</award-id>
</award-group>
<award-group id="gs2">
<funding-source>Division of Mathematical Sciences</funding-source>
<award-id>1520786</award-id>
</award-group>
<award-group id="gs3">
<funding-source>National Oceanic and Atmospheric Administration</funding-source>
<award-id>NA21OAR4310258</award-id>
<award-id>NA21OAR4310261</award-id>
</award-group>
<award-group id="gs4">
<funding-source>Directorate for Geosciences</funding-source>
<award-id>1928305</award-id>
</award-group>
</funding-group>
</article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e146">Tropical cyclones (TCs) occur in most oceanic basins, posing a substantial risk to many communities across the globe.  This risk is exacerbated in a warming climate, in which heightened ocean heat content and sea surface temperatures (SSTs) contribute to stronger and longer-lasting TCs, with intensified flooding from increased atmospheric moisture <xref ref-type="bibr" rid="bib1.bibx74 bib1.bibx58 bib1.bibx67 bib1.bibx75 bib1.bibx84" id="paren.1"/>. The predominant theory holds that TCs are chiefly driven by air–sea interchange of thermal energy (e.g., <xref ref-type="bibr" rid="bib1.bibx20 bib1.bibx21" id="altparen.2"/>), with SSTs above 26.5 °C conducive to TC intensification <xref ref-type="bibr" rid="bib1.bibx48" id="paren.3"/>.  The intensification of TCs generates several observable physical phenomena, including extraction of energy from the ocean surface layer and upward mixing of cooler subsurface water, both of which register as “cold wakes”, i.e., lower temperatures compared to the pre-TC passage baseline <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx29 bib1.bibx26" id="paren.4"/>.  This cooling of surface waters yields a decrease in SST, possibly inhibiting further TC intensification or even maintenance of current intensity <xref ref-type="bibr" rid="bib1.bibx5 bib1.bibx68" id="paren.5"/>.  The subtle interplay between TC intensification and upper-ocean thermal energy is therefore important for accurate TC intensity forecasts <xref ref-type="bibr" rid="bib1.bibx47" id="paren.6"/>.</p>
      <p id="d1e168">Even after decades of research on TCs, a full understanding of the physics of the air–sea interface at high wind speeds is missing, which hinders our ability to simulate the structure and intensity of hurricane-strength storms <xref ref-type="bibr" rid="bib1.bibx19" id="paren.7"/>. The principal aim of this paper is to provide a statistical methodology to characterize temperature changes in the near-surface and subsurface ocean associated with the passage of a TC, given temperature observations from autonomous robotic devices called Argo floats <xref ref-type="bibr" rid="bib1.bibx33" id="paren.8"/>. In a naive sense, one may observe the TC-induced temperature change merely by comparing Argo temperature values, as a function of depth, recorded before and after the passage of a TC, as in Fig. <xref ref-type="fig" rid="Ch1.F1"/>. However, the scarcity of such observations makes it nontrivial to obtain a more detailed characterization of the TC-induced signal.  Here we develop a methodology that enables such a characterization as a function of perpendicular distance<fn id="Ch1.Footn1"><p id="d1e179">Measured in terms of the angular distance to the nearest point on the TC track and alternately referred to as the “cross-track distance” and the “cross-track angle”.</p></fn> from the TC track, time since TC passage, and subsurface depth.  We call this the <italic>TC-induced signal</italic> (or “TC signal”) in a <italic>TC-centric coordinate system</italic>.</p>
      <p id="d1e190">Challenges that remain in improving estimates of TC-induced ocean temperature changes include (1) the high-noise environment of the ocean, coupled with the relative scarcity of in situ observations, which makes it difficult to observe statistically meaningful effects;  (2) the need to disentangle the TC-induced signal from other, unrelated signals also present in the data, such as a seasonal warming effect that occurs in the ocean during the summer months; and (3) the highly correlated nature of the spatiotemporal Argo profiles, which necessitates careful estimation of the covariance between profiles located close to each other in space and time.  In addressing each of these obstacles posed by the complex data model within which we work, we obtain an estimate of the TC-induced signal with a reasonable signal-to-noise ratio.</p>
      <p id="d1e193">The underlying statistical framework can be framed in terms of a classical ANOVA decomposition of each temperature profile into a TC-induced signal, seasonal mean effect, and ocean variability. At first glance, this appears to be a spatiotemporal ANOVA model (e.g., <xref ref-type="bibr" rid="bib1.bibx46" id="altparen.9"/>).  However, one must carefully note that, while the seasonal mean effect and ocean variability are measured in the geographic coordinates of longitude, latitude, and time of year, the TC-induced signal is parameterized in the TC-centric coordinate system. These separate coordinate systems, and the ANOVA decomposition bridging these two domains, will be formalized in the methodological development. This novel twist on the usual spatiotemporal ANOVA model allows us to pool TC-related ocean temperature observations from all TC regions for the entire TC season, and indeed across TC seasons, while still producing our estimate of the TC-induced signal in its natural TC-centric coordinate system.</p>
      <p id="d1e200">The past work closest to our own is <xref ref-type="bibr" rid="bib1.bibx6" id="text.10"/>, which uses an Argo profile pairing procedure to perform a temporally binned analysis of thermal changes in depth and cross-track distance.  We build upon this pairing process, which takes advantage of the highly correlated nature of spatiotemporal data, to make the following contributions.  First, we provide a methodology to estimate the seasonal shift in upper-ocean temperature over the time span of the profile pairs considered, based upon prior oceanographic work <xref ref-type="bibr" rid="bib1.bibx62 bib1.bibx64" id="paren.11"/>. We find a nontrivial seasonal effect over the time span of the profile pairs in our analysis, as most TCs occur during months when the subsurface water column experiences warming. Armed with this information, we adjust the temperature differences by removing the estimated seasonal shift. The previous analysis of <xref ref-type="bibr" rid="bib1.bibx6" id="text.12"/> does not perform this seasonal adjustment, which may impact their estimate of the TC-related signal at longer time lags, as the seasonal warming would not be distinguished from their TC-related signal.</p>
      <p id="d1e212">For these seasonally adjusted temperature differences, we further detail a method for estimating their self-variances and cross-covariances, based upon the locally stationary Gaussian process model of <xref ref-type="bibr" rid="bib1.bibx36" id="text.13"/>.  The reasons for fitting these covariances prior to producing the final fits are twofold: ocean dynamics conspire to produce additional heteroskedastic noise at large time lags, and pairs of profiles, especially those nearby in space and time, can be highly correlated. These covariance estimates are then used in a thin-plate spline smoother to account for the effect of the correlated, heteroskedastic observations and to provide pointwise confidence intervals.  Through these steps, we attain the chief scientific contributions of characterizing the ocean response to TC passage in the continuous time realm, rather than using a binned analysis as in <xref ref-type="bibr" rid="bib1.bibx6" id="text.14"/>, and properly accounting for the seasonal variation in ocean temperatures over the timescales of the paired profiles. Moreover, our estimation of covariances between profiles co-located in space and time, which were not accounted for in <xref ref-type="bibr" rid="bib1.bibx6" id="text.15"/>, admits more accurate fits and enables rigorous uncertainty quantification.  These statistical procedures are unified in terms of an ANOVA decomposition, which is fit separately over a grid of 20 depth levels.</p>
      <p id="d1e224">Through this model, we more accurately characterize ocean cooling in the near-surface and subsurface waters as well as the mixing-induced warming in the subsurface on one side of the TC center. For a fixed depth, this characterization of the TC signal is performed by estimating a continuous function of the cross-track distance and time since TC passage.  We then repeat this estimation over a fine grid of depths from the ocean surface to 200 m below the surface, using Argo profiles and TC track data from 2007 to 2018.  In particular, since our estimates of the temperature change vary continuously over these three axes (cross-track distance, time since TC passage, and depth), we are able to produce a three-dimensional characterization of the aforementioned scientific phenomena.</p>
      <p id="d1e227">The organization of the paper is as follows. Section <xref ref-type="sec" rid="Ch1.S2"/> formally motivates, in oceanographic, meteorological, and climatological terms, the scientific problem of estimating the ocean thermal response to tropical cyclone passage. Section <xref ref-type="sec" rid="Ch1.S3"/> introduces the tropical cyclone track data and the Argo profile data. Section <xref ref-type="sec" rid="Ch1.S4"/> describes our methodology, where we begin by presenting the ANOVA-type data model and its implied data analysis pipeline.  Data preprocessing is reviewed in Sect. <xref ref-type="sec" rid="Ch1.S4.SS1"/>, and the process for pairing profiles and projecting pairs onto TC tracks is detailed in Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>.  A local mean field model for capturing TC-unrelated seasonal effects is described in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>, followed by a Gaussian process model for estimating ocean variability in Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>.  In Sect. <xref ref-type="sec" rid="Ch1.S4.SS5"/>, we describe a version of the thin-plate spline that allows for covariance reweighting. Section <xref ref-type="sec" rid="Ch1.S5"/> describes the results of applying our methodology to the estimation of the global ocean thermal response to TCs.  We conclude with a discussion of the results and future directions in Sect. <xref ref-type="sec" rid="Ch1.S6"/>.</p>
      <p id="d1e251">Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/> provides a comprehensive review of the motivation and derivation for the thin-plate spline variant used, and Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/> details the leave-one-out cross-validation procedure used to select the regularization parameter. A full set of model fits is provided in the Supplement. In the spirit of reproducibility and to encourage the extension of these results, the code used to process the data and fit these models is freely available online at <uri>https://github.com/huisaddison/tc-ocean-methods</uri> (last access: 30 December 2020).</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Scientific context</title>
      <p id="d1e269">A prevailing theory states that tropical cyclones are primarily driven by two physical phenomena: (1) energy flux from the ocean and (2) the temperature difference between the ocean surface and the tropopause, the top boundary of the lowest layer of Earth's atmosphere, in a process called wind-induced surface heat exchange (WISHE; e.g., <xref ref-type="bibr" rid="bib1.bibx20 bib1.bibx21" id="altparen.16"/>).  SSTs of at least 26.5 °C are generally sufficient to support TC genesis <xref ref-type="bibr" rid="bib1.bibx48" id="paren.17"/>, and additional energy becomes available to the TC as SSTs increase beyond this threshold.</p>
      <p id="d1e278">As TCs intensify, their strengthening surface winds extract energy from the ocean surface and induce mixing of the upper ocean.  This combination of processes decreases SST (creating a cold wake) and thus decreases the energy available for further TC intensification <xref ref-type="bibr" rid="bib1.bibx5 bib1.bibx68" id="paren.18"/>. The magnitude of mixing depends on the strength of the TC's surface winds, its size, and its translation speed as well as the background ocean conditions. Therefore, knowledge of subsurface ocean conditions can impact the accuracy of TC intensity forecasts (e.g., <xref ref-type="bibr" rid="bib1.bibx47" id="altparen.19"/>). Such information, however, is difficult to obtain through remotely sensed, satellite-based observations, necessitating the introduction of in situ measurements, such as those provided by the Argo float program <xref ref-type="bibr" rid="bib1.bibx33" id="paren.20"/>.</p>
      <p id="d1e290">Latent heat, the energy needed to evaporate liquid water and released when water vapor condenses, is the primary mechanism by which energy is transferred from the ocean to the atmosphere.  Through latent heat transfer, the passage of a TC induces temperature decreases at the ocean surface and within the ocean mixed layer <xref ref-type="bibr" rid="bib1.bibx22 bib1.bibx38 bib1.bibx5 bib1.bibx12 bib1.bibx40 bib1.bibx44 bib1.bibx3 bib1.bibx17 bib1.bibx59" id="paren.21"/>. Observational studies have examined the thermodynamic response of the ocean surface to TC passage via observations from survey ships or expendable bathythermographs <xref ref-type="bibr" rid="bib1.bibx59 bib1.bibx69 bib1.bibx8 bib1.bibx12 bib1.bibx11 bib1.bibx26" id="paren.22"/>, especially before the Argo array of profiling floats was deployed.</p>
      <p id="d1e299">With more than 2 million profiles since the early 2000s, Argo floats provide unprecedented spatial and temporal coverage of the global ocean in the upper 2000 m <xref ref-type="bibr" rid="bib1.bibx64 bib1.bibx63 bib1.bibx33" id="paren.23"/>.  Due to their autonomous nature, Argo floats are well-positioned to sample the ocean state in three dimensions before and after TC passage. Several previous studies have leveraged Argo profiles to describe TC-related changes in the upper ocean <xref ref-type="bibr" rid="bib1.bibx42 bib1.bibx4 bib1.bibx72 bib1.bibx60 bib1.bibx6 bib1.bibx41 bib1.bibx71 bib1.bibx74" id="paren.24"/>, focusing on changes in ocean temperature, salinity, or both in order to analyze changes in ocean density. The closest work to ours is <xref ref-type="bibr" rid="bib1.bibx6" id="text.25"/>, who performed a binned analysis of temperature changes in time (compared to our continuous treatment of time) and did not account for a seasonal warming effect we discern in our analysis.  An earlier paired analysis in the North Pacific was performed by <xref ref-type="bibr" rid="bib1.bibx56" id="text.26"/>.</p>
      <p id="d1e315">Processes regulating the thermal recovery of cold ocean wakes associated with the passage of a TC depend on the parameters of the wake, e.g., depth, width, or wind stress <xref ref-type="bibr" rid="bib1.bibx29" id="paren.27"/>. Once a TC passes, thermal recovery results in a net warming of the water column, a warming which increases with TC intensity <xref ref-type="bibr" rid="bib1.bibx51" id="paren.28"/>. Globally, this net ocean warming is on the order of 0.5 PW <xref ref-type="bibr" rid="bib1.bibx70 bib1.bibx49 bib1.bibx50 bib1.bibx51" id="paren.29"/>, equivalent to approximately <inline-formula><mml:math id="M1" display="inline"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">6</mml:mn></mml:mfrac></mml:mstyle></mml:math></inline-formula> of the ocean heat transport out of the tropics <xref ref-type="bibr" rid="bib1.bibx83" id="paren.30"/>.  In the long-term mean, this added heat is either advected poleward by ocean currents <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx35" id="paren.31"/> or eventually released into the atmosphere during subsequent cold seasons <xref ref-type="bibr" rid="bib1.bibx57 bib1.bibx32" id="paren.32"/>.  For stronger TCs, part of the extra ocean warming occurs below the winter mixed-layer depth <xref ref-type="bibr" rid="bib1.bibx51" id="paren.33"/> and can influence global meridional heat transport. However, the transport of this heat may be primarily equatorward <xref ref-type="bibr" rid="bib1.bibx31" id="paren.34"/>, in which case the heat transport would not contribute to the redistribution of heat within the climate system from the warmer tropics to the colder poles. The methodological framework presented in this paper provides an opportunity to contribute to this ongoing discussion because it helps characterize the evolution of TC-related ocean temperature changes in greater detail, accuracy, and rigor than previously available.</p>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Data</title>
      <p id="d1e362">The methodology described in this paper requires two main sources of data: TC track records and subsurface temperature profile databases, both described in the following subsections.</p>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Tropical cyclone track data</title>
      <p id="d1e372">We obtain TC <italic>best-track</italic> data from the National Hurricane Center (NHC) and the United States Navy Joint Typhoon Warning Center (JTWC). Best-track data are produced in post-season analysis using all available observations, e.g., satellite microwave imagery and aircraft reconnaissance, to generate the best estimate of TC location and intensity. Data are 6-hourly with occasional extra time points for landfall. The NHC Hurricane Database (HURDAT2) provides best-track data for the North Atlantic and eastern Pacific basins <xref ref-type="bibr" rid="bib1.bibx37" id="paren.35"/>.  The best-track data for the western Pacific basin, North Indian Ocean basin, and basins in the Southern Hemisphere are obtained from the JTWC <xref ref-type="bibr" rid="bib1.bibx7" id="paren.36"/>. Together, these five regions capture all TC activity on Earth.  We chose to use best-track data from the NHC and the JTWC because both agencies provide TC intensity estimates based upon a common definition of 1 min, 10 m maximum sustained wind, rounded to the nearest 5 kn.  A final, important remark when considering data from the different ocean basins is the fact that aircraft reconnaissance is present in the North Atlantic but largely absent in the other basins, likely providing more accurate TC intensity estimates in the North Atlantic compared to elsewhere.</p>
      <p id="d1e384">We consider all TCs from 2007 to 2018.  The start year of 2007 is chosen to ensure sufficient coverage by Argo floats, detailed in the following section.  Over this span of 12 years, we have a total of 1089 tracks, with 191 in the North Atlantic, 223 in the western Pacific, 339 in the eastern Pacific, 66 in the North Indian Ocean, and 270 in the Southern Hemisphere.  These tracks are depicted in Fig. 3a.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Argo float data</title>
      <p id="d1e395">Argo is a network of autonomous floats sampling global subsurface ocean temperature and salinity, with each float reporting roughly every 10 d. Argo floats have been deployed since the early 2000s and reached the desired nominal distribution of one float for every <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> longitude by <inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> latitude box in the global ice-free ocean in 2007 <xref ref-type="bibr" rid="bib1.bibx33" id="paren.37"/>, providing unprecedented subsurface spatial and temporal coverage, with no seasonal sampling bias <xref ref-type="bibr" rid="bib1.bibx64" id="paren.38"/>.   The geographical distribution of Argo floats is depicted in Fig. <xref ref-type="fig" rid="Ch1.F1"/>a. Each Argo observation consists of temperature and salinity measurements, indexed by pressure, taken as the Argo float ascends to the surface from a depth of roughly 2000 m. The resulting vertical profile is associated with a time stamp as well as satellite-determined latitude and longitude coordinates. Figure <xref ref-type="fig" rid="Ch1.F1"/>b plots two such temperature profiles, reported in roughly the same location before and after the passage of Hurricane Maria (2017).  The leftward shift from the first profile to the second (denoted with an orange arrow) illustrates the reduction in thermal energy associated with Hurricane Maria's passage.  The green arrow illustrates the deepening of the <italic>thermocline</italic>, the change point between an upper, well-mixed layer and cooler subsurface waters, as a result of increased mixing. For the rest of the paper, we will interchangeably use the terms “depth”, which is more familiar, and “pressure”, which is more accurate. Argo floats record pressure in decibars (dbar), and a 1 dbar change in pressure corresponds to approximately 1 m change in depth <xref ref-type="bibr" rid="bib1.bibx73" id="paren.39"/>.</p>

      <fig id="Ch1.F1" specific-use="star"><label>Figure 1</label><caption><p id="d1e437"><bold>(a)</bold> Argo floats have achieved global coverage since 2007 <xref ref-type="bibr" rid="bib1.bibx2" id="paren.40"/>. <bold>(b)</bold> Two consecutive temperature profiles from the same Argo float near Puerto Rico in 2017: one before and one after the passage of Hurricane Maria.  The orange arrow depicts the net removal of thermal energy from the ocean, while the green arrow illustrates the deepening of the thermocline as a result of increased mixing. </p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f01.png"/>

        </fig>

      <p id="d1e454">For our purposes, the chief contribution of Argo to our oceanographic and meteorological pursuits is its provision of vertical information, from the surface of the ocean to roughly 2000 m below the surface, in tandem with its global coverage, with one float per <inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> longitude by <inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> latitude box on average <xref ref-type="bibr" rid="bib1.bibx33" id="paren.41"/>. The vertical information from the Argo profiles, unattainable by remote sensing methods such as satellites, is key to quantifying the thermal response of the ocean to the passage of a TC, which varies with depth. Argo profiles, however, are not without shortcomings for our purposes; their spatiotemporal resolution is coarser than typical TC spatial scales and timescales, which necessitates the statistical methods developed herein.</p>
      <p id="d1e481">An Argo float takes a profile in the following fashion.  Every sampling period, typically every 10 d, the float descends from its “parking” depth of 1000 m to a profiling depth of 2000 m and then ascends from 2000 m to the surface over the course of about 6 h, taking observations of temperature and salinity along the way <xref ref-type="bibr" rid="bib1.bibx33" id="paren.42"/>. It then rests at the surface for 15 min to 1 h, determining its location and communicating its measurements via satellite.  Finally, the float returns to its parking depth until its next sampling period to minimize float drift.</p>
      <p id="d1e487">In this study, we refer to an individual Argo device as a “float” and to the measurements taken vertically at a certain longitude, latitude, and time as a “profile”.  Each Argo profile is uniquely identified by its float identifier (unique to an Argo float) and cycle number (for a given float, unique to each profile).</p>
</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>TC-centric coordinate system</title>
      <p id="d1e498">To quantify the ocean thermal response to the passage of a TC, we perform a pairing procedure inspired by <xref ref-type="bibr" rid="bib1.bibx6" id="text.43"/>. Intuitively, we seek pairs of profiles which “straddle” the passage of TC, i.e., one observation before and one observation during or after the TC passage. These Argo profile pairs are placed in a TC-centric coordinate system through a projection process, which rewrites the space–time coordinates of an Argo profile pair in reference to a passing tropical cyclone.  Figure <xref ref-type="fig" rid="Ch1.F2"/> illustrates this process using the TC track and profile pairs associated with Hurricane Maria (2017), and the full set of profile pairs in the TC-centric coordinate system is depicted in Fig. <xref ref-type="fig" rid="Ch1.F3"/>b. The pairing and projection procedures are formalized in Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>.</p>

      <fig id="Ch1.F2" specific-use="star"><label>Figure 2</label><caption><p id="d1e512">Illustration of the coordinate systems with Hurricane Maria (2017). Panel <bold>(a)</bold> uses the latitude–longitude coordinate system to show the path of the storm in red and the location of the Argo profile pairs straddling the storm passage in black. Panel <bold>(b)</bold> plots those same pairs of profiles in the TC-centric coordinate system. It is possible for one black point in the latitude–longitude coordinate system to correspond to multiple observations in the TC-centric coordinate system, if a single profile occurring before TC passage is paired with multiple profiles occurring after TC passage. </p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f02.png"/>

        </fig>

      <fig id="Ch1.F3" specific-use="star"><label>Figure 3</label><caption><p id="d1e529"><bold>(a)</bold> Global tropical cyclones from 2007 to 2018 in the latitude–longitude coordinate system, for 1089 tracks in total. <bold>(b)</bold> Argo profile pairs in the TC-centric coordinate system, for 16 025 pairs in total. Marginal histograms illustrate the density of the pairs along the time and cross-track axes. </p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f03.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Statistical methodology</title>
      <p id="d1e552">The methodology introduced in this paper aims to produce a representation of the TC-induced change in ocean temperature, at a sequence of fixed depths and as a continuous function of time since the tropical cyclone passage and cross-track distance from the center of the tropical cyclone path.  To properly characterize these temperature changes, we combine a variety of techniques for pairing Argo profiles, estimating seasonal effects, modeling space–time covariances, and smoothing in multiple dimensions.</p>
      <p id="d1e555">All notations will be formally introduced in their requisite subsections, but in general <inline-formula><mml:math id="M6" display="inline"><mml:mi mathvariant="bold-italic">x</mml:mi></mml:math></inline-formula> refers to a location in the latitude–longitude coordinate system, <inline-formula><mml:math id="M7" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> refers to the day of the year, <inline-formula><mml:math id="M8" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula> refers to the cross-track angle between a location and the center of the storm path, and <inline-formula><mml:math id="M9" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> refers to the time difference between a post-storm Argo profile and the passage of the tropical cyclone with which is it associated, measured in days.</p>
      <p id="d1e586">Before the detailed exposition, we provide a high-level explanation of our modeling approach, which will be further formalized as an ANOVA decomposition data model.  First, we partition the Argo profile database into “TC profiles”, which report time stamps immediately before and after the passage of a TC, and “non-TC profiles”, which are bounded away from TCs in space and time (Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS2"/>).  Using the TC profiles, we form in Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/> pairs of Argo profiles, in which the two profiles “straddle” the passage of a TC; i.e., one profile occurs before (the “baseline” profile) and one profile occurs during or after the TC passage (the “signal” profile).  Then, we decompose the observed temperature difference (at each pressure level) between the baseline and signal profiles in the following manner.
          <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M10" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mtext>Temperature difference</mml:mtext></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:mtext>TC signal</mml:mtext><mml:mo>+</mml:mo><mml:mtext>seasonal effect</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:mtext>ocean variability</mml:mtext></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
        The nonrandom <italic>seasonal effect</italic> term is estimated in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/> and is subtracted from the temperature differences to produce seasonally adjusted temperature differences.  The <italic>ocean variability</italic> (noise) term is then estimated in Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>; it is the only term on the right-hand side regarded as random.  These two terms describe the state of the ocean under the assumption that there are no TC-induced effects; therefore, partitioning of Argo profiles into TC and non-TC profiles in Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS2"/> is crucial to their estimation, as the latter observe the ocean in the TC-absent regime.</p>
      <p id="d1e635">The key subject of interest is the TC signal term, which we denote by <inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> to emphasize its dependence on the cross-track distance from the storm center and the time since storm passage. Our goal is to make inferences for functionals <inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:mi>H</mml:mi><mml:mo>(</mml:mo><mml:mi>s</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> of <inline-formula><mml:math id="M13" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula>.  This includes point evaluators, e.g., <inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:mi>H</mml:mi><mml:mo>(</mml:mo><mml:mi>s</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>d</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, as in Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/>, and binned quantities, e.g., <inline-formula><mml:math id="M15" display="inline"><mml:mrow><mml:mi>H</mml:mi><mml:mo>(</mml:mo><mml:mi>s</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:msubsup><mml:mo>∫</mml:mo><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">τ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:msubsup><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>d</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo><mml:mi mathvariant="normal">d</mml:mi><mml:mi mathvariant="italic">τ</mml:mi></mml:mrow></mml:math></inline-formula>, as in Sect. <xref ref-type="sec" rid="Ch1.S5.SS4"/>.</p>
      <p id="d1e785">To elucidate the estimation of <inline-formula><mml:math id="M16" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, we describe each of the terms in Eq. (<xref ref-type="disp-formula" rid="Ch1.E1"/>) formally, in terms of an ANOVA decomposition. Let <inline-formula><mml:math id="M17" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> denote an Argo temperature observation, evaluated at a fixed pressure level <inline-formula><mml:math id="M18" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>.  The <italic>temperature difference</italic> is the difference between the two terms <inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>:

              <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M20" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E2"><mml:mtd><mml:mtext>2</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>m</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>+</mml:mo><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E3"><mml:mtd><mml:mtext>3</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>;</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mo>+</mml:mo><mml:mi>m</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          where <inline-formula><mml:math id="M21" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> is a seasonal mean field and <inline-formula><mml:math id="M22" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> is a Gaussian process term describing non-TC ocean variability, both elucidated fully in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/> and <xref ref-type="sec" rid="Ch1.S4.SS4"/>.</p>
      <p id="d1e1099">A few remarks are in order.  First, note that <inline-formula><mml:math id="M23" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>signal</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is written as a function of both Earth's coordinates <inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and TC-centric coordinates <inline-formula><mml:math id="M25" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, which are uniquely determined by Earth's coordinates and the associated TC path.  This is no accident: while <inline-formula><mml:math id="M26" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M27" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> are estimated and only have meaning in terms of Earth's coordinates, <inline-formula><mml:math id="M28" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula> is estimated and only has meaning in terms of TC-centric coordinates. Second, we observe that, in theory, Eq. (<xref ref-type="disp-formula" rid="Ch1.E3"/>) suggests that one may directly estimate <inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> using only observations of <inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>signal</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (and the non-TC profile set). Unfortunately, one finds that the magnitude of <inline-formula><mml:math id="M31" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> is such that estimating <inline-formula><mml:math id="M32" display="inline"><mml:mi>s</mml:mi></mml:math></inline-formula> solely using <inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>signal</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is difficult, due to a low signal-to-noise ratio.  By taking the temperature difference <inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, we take advantage of the high correlation between <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> to yield results with a considerably better signal-to-noise ratio.</p>

      <fig id="Ch1.F4" specific-use="star"><label>Figure 4</label><caption><p id="d1e1316">Illustration of the multi-step framework as a data analysis pipeline. The data and results are denoted in blue, and the statistical models are denoted in green. </p></caption>
        <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f04.png"/>

      </fig>

      <p id="d1e1325">The partitioning of the Argo profile database into TC and non-TC profile sets is described in Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS2"/>. The pairing process and the construction of the observed temperature difference are detailed in Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>.  Section <xref ref-type="sec" rid="Ch1.S4.SS3"/> explains the estimation of the seasonal effect based upon spatiotemporal local regression modeling, and Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/> describes a space–time Gaussian process model for the remaining ocean variability term.  Finally, Sect. <xref ref-type="sec" rid="Ch1.S4.SS5"/> leverages thin-plate splines to produce a final fit of the TC signal <inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. We depict the full framework as a data analysis pipeline in Fig. <xref ref-type="fig" rid="Ch1.F4"/>.</p>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Argo profile preprocessing</title>
      <p id="d1e1366">In this section, we describe two key preprocessing steps performed on the Argo profiles.</p>
<sec id="Ch1.S4.SS1.SSS1">
  <label>4.1.1</label><title>Interpolation and averaging</title>
      <p id="d1e1377">An unprocessed Argo temperature profile consists of a sequence of <inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mo mathvariant="italic">{</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>z</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula> which relates pressure level <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msub><mml:mi>z</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> to temperature measurements <inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.  We take each Argo temperature profile and interpolate them from a pressure level of <inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> dbar to <inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> dbar using a piecewise cubic Hermite interpolating polynomial (pchip interpolant; <xref ref-type="bibr" rid="bib1.bibx23" id="altparen.44"/>). We then read off 20 equally spaced values from <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> dbar to <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> dbar, including the endpoints. We also compute the average temperature by performing a trapezoidal integration of the pchip over a grid of 5000 evaluations, normalized by the length of integration (190 dbar).  We refer to the former as the <italic>gridded</italic> temperature values and to the latter as the <italic>vertically averaged</italic> temperature values.</p>
      <p id="d1e1486">In the analysis that follows, we use the term <italic>Argo profile</italic> to refer to the collection of the 20 gridded temperature values and the vertically averaged temperature value.  The partitioning, pairing, and projection procedures of Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS2"/> and <xref ref-type="sec" rid="Ch1.S4.SS2"/> operate on these collections of values on the profile level.  The statistical methodology, developed in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>, <xref ref-type="sec" rid="Ch1.S4.SS4"/>, and <xref ref-type="sec" rid="Ch1.S4.SS5"/>, considers each of the gridded pressure levels (and the vertically averaged temperature values) separately; i.e., the statistical analysis is performed 21 times, for each of <inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> and for the averaged temperatures.</p>
      <p id="d1e1523">We use <inline-formula><mml:math id="M46" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> to denote a single temperature value, either the evaluation of the pchip interpolant at a pressure level <inline-formula><mml:math id="M47" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> or the vertically averaged value.  As the methodology is identical for each pressure level and for the vertically averaged profiles, we do not burden <inline-formula><mml:math id="M48" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> with additional notation; which of the gridded and vertically averaged temperature values it is will be made clear from the context.</p>
</sec>
<sec id="Ch1.S4.SS1.SSS2">
  <label>4.1.2</label><title>TC profiles and non-TC profiles</title>
      <p id="d1e1555">We further partition the Argo profile database into two sets, which separately characterize the ocean state in the presence and absence of TCs.  If an Argo profile is within <inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:mn mathvariant="normal">8</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (latitude and longitude) of a tropical cyclone observation location and within <inline-formula><mml:math id="M50" display="inline"><mml:mn mathvariant="normal">12</mml:mn></mml:math></inline-formula> d before to <inline-formula><mml:math id="M51" display="inline"><mml:mn mathvariant="normal">20</mml:mn></mml:math></inline-formula> d after that tropical cyclone observation, we denote it as a <italic>tropical cyclone profile</italic> (TC profile).  Any profile not in this set is denoted as a <italic>non-tropical cyclone profile</italic> (non-TC profile). Though the non-TC profiles do not carry any of the TC signal <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, they play a crucial role in estimating the seasonal effect <inline-formula><mml:math id="M53" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> and ocean variability <inline-formula><mml:math id="M54" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, which characterize the ocean state and dynamics under the important assumption that there are no TC-related effects.  These models are fully described in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/> and <xref ref-type="sec" rid="Ch1.S4.SS4"/>.</p>
</sec>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Profile–TC association process</title>
      <p id="d1e1635">To associate Argo profiles with tropical cyclones, we perform a two-step procedure of <italic>pairing</italic> and <italic>projection</italic>.  In the pairing step, we identify Argo profiles that are close to each other and straddle a passing tropical cyclone such that one profile is observed before the storm to characterize the pre-storm ocean state (referred to as the <italic>baseline</italic> profile), and another is observed during or after the storm to characterize the change in the ocean state (referred to as the <italic>signal</italic> profile).  In the projection step, we change the coordinate system of the Argo profile pairs to one parameterized in terms of the passing tropical cyclone.  This is done by performing an orthogonal projection of the Argo profile pair onto the tropical cyclone track.  Both procedures are formalized in the sequel.</p>
      <p id="d1e1650">We first establish notation. Define the <italic>Earth coordinates</italic> as <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>;</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, i.e., the longitude, latitude, and time that the baseline and signal profiles were taken, and the TC-centric coordinates as <inline-formula><mml:math id="M56" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M57" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula> is the signed great circle angular distance on Earth between <inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, the orthogonal projection onto the tropical cyclone track, and <inline-formula><mml:math id="M60" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> is the time difference between <inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, the time when the tropical cyclone was at <inline-formula><mml:math id="M63" display="inline"><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>.  Due to the closeness constraints that we impose between the baseline and signal profiles, described in the following subsection, only one set of longitude–latitude coordinates is necessary for both profiles.</p>
<sec id="Ch1.S4.SS2.SSS1">
  <label>4.2.1</label><title>Pairing process</title>
      <p id="d1e1843">We follow closely the pairing process introduced in <xref ref-type="bibr" rid="bib1.bibx6" id="text.45"/>. Recall that the tropical cyclone tracks are available at 6-hourly time resolution and can be made continuous in time and space through straight line interpolation.  Along each of these TC tracks, we seek Argo profiles that reported within <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">8</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (longitude–latitude) and within <inline-formula><mml:math id="M65" display="inline"><mml:mn mathvariant="normal">12</mml:mn></mml:math></inline-formula> d before to <inline-formula><mml:math id="M66" display="inline"><mml:mn mathvariant="normal">20</mml:mn></mml:math></inline-formula> d after each location on the tropical cyclone track.  We partition these profiles into the baseline set (<inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> d relative to the TC) and the <italic>signal</italic> set (<inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:mo>+</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> d relative to the TC).  These two sets contain the profiles that are incidental to the TC.  The baseline and signal time ranges are chosen primarily to accommodate sampling constraints posed by the Argo network; specifically, most floats sample on a 10 d frequency. Therefore, the baseline time range of <inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> d ensures that each float can contribute at least one baseline profile.  The signal time range allows for at least two signal profiles from a given float (assuming they fit a nearness condition detailed in the sequel).  The signal profiles begin at <inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> d to hedge against storm effects prior to passage and are consistent with the pairing process introduced by <xref ref-type="bibr" rid="bib1.bibx6" id="text.46"/>.</p>
      <p id="d1e1953">Among profiles incidental to a given TC, we perform a pairing process as follows.  If there exist a profile in the baseline set and a profile in the signal set that are at most <inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.2</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> apart<fn id="Ch1.Footn2"><p id="d1e1966">The <inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.2</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> is measured in the induced angle between points on Earth's surface and the center of Earth and is invariant to the location on Earth at which the angle is calculated.  This corresponds roughly to a maximum distance of 22 km.  For reference, the JTWC considers TCs of radius <inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> to be “very small” <xref ref-type="bibr" rid="bib1.bibx34" id="paren.47"/>.</p></fn>, we pair them, yielding a <italic>baseline profile</italic> and <italic>signal profile</italic> pair.  Under this closeness restriction, we make the simplifying assumption that the baseline and signal locations are spatially identical, and for each pair we use the baseline location as the reference point.  We defer a discussion of how to potentially extend our model to account for Argo float movement and rigorously incorporate intra-pair spatial differences to Sect. <xref ref-type="sec" rid="Ch1.S6"/>.</p>
      <p id="d1e2003">We impose an additional technical restriction with respect to the <italic>lineage</italic> of a baseline profile, which is defined as the set of all signal profiles associated with a distinct baseline profile and that baseline profile itself. We require that all profiles in the lineage of a baseline profile must be separated in time by at least 72 h, sparsifying the lineage. To our knowledge, <xref ref-type="bibr" rid="bib1.bibx6" id="text.48"/> impose no such constraint. The choice of this separation is for a particular reason: we know that pairs of profiles close in time tend to be highly correlated, but our Gaussian process model <xref ref-type="bibr" rid="bib1.bibx36" id="paren.49"/> for estimating the correlations between pairs of profiles that are close in space and time (a prerequisite for properly handling them in the final thin-plate spline fit) may not provide reliable estimates in the rare cases where profiles occur more frequently than 3 d apart. Following a filter on the minimum time separation within each lineage, we retain 16 025 profile pairs across all five ocean regions: 2757 in the North Atlantic, 2897 in the eastern Pacific, 778 in the Indian Ocean, 2185 in the Southern Hemisphere, and 7409 in the western Pacific.</p>
</sec>
<sec id="Ch1.S4.SS2.SSS2">
  <label>4.2.2</label><title>Projection process</title>
      <p id="d1e2023">Given these Argo profile pairs, which we know straddle a TC path, we require a procedure for precisely describing the profile pair's location in space and time relative to the passage of the tropical cyclone.  Recall that we formally denote the location of the Argo profile pair by <inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>;</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and that there is no distinction between the baseline and signal locations, as we assume they are the same. Through our pairing procedure, we rewrite the coordinates of the Argo profile pair with respect to a nearby tropical cyclone in terms of <inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e2118">The projection procedure proceeds as follows.  Each tropical cyclone track is made continuous through straight line interpolation.  We project each profile pair from <inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, the nearest point on the tropical cyclone track in the Euclidean sense.  Given <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, we obtain <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, the time at which the tropical cyclone was at <inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, using linear interpolation.  Finally, we obtain the cross-track angle
              <disp-formula id="Ch1.E4" content-type="numbered"><label>4</label><mml:math id="M84" display="block"><mml:mrow><mml:mi>d</mml:mi><mml:mo>≜</mml:mo><mml:mi mathvariant="normal">∠</mml:mi><mml:mo>(</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>,</mml:mo><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>)</mml:mo></mml:mrow></mml:math></disp-formula>
            and the time since passage
              <disp-formula id="Ch1.E5" content-type="numbered"><label>5</label><mml:math id="M85" display="block"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>≜</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where <inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:mi mathvariant="normal">∠</mml:mi><mml:mo>(</mml:mo><mml:mo>⋅</mml:mo><mml:mo>,</mml:mo><mml:mo>⋅</mml:mo><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the induced angle between two points on Earth's surface with respect to its center, and the subtraction in Eq. (<xref ref-type="disp-formula" rid="Ch1.E5"/>) is performed in a “year-aware” fashion; i.e., if the year–day difference is negative, as may happen over the new year, then we add the number of days in the year prior to the difference. The projection process is depicted in Fig. <xref ref-type="fig" rid="Ch1.F2"/>, using profile pairs associated with Hurricane Maria (2017) as an example.</p>
</sec>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Seasonal mean field estimation</title>
      <p id="d1e2369">Although the temperature differences induced by tropical cyclone passage occur on relatively small temporal scales, there is a nontrivial seasonal effect experienced by the ocean during the tropical cyclone season, at the timescales considered in our analysis.  We focus here on the methodology for estimating the seasonal cycle and fully detail the resulting empirical findings in Sect. <xref ref-type="sec" rid="Ch1.S5"/>.  In order to properly account for the seasonal effect, we adapt previous methodology <xref ref-type="bibr" rid="bib1.bibx62 bib1.bibx64" id="paren.50"/> to estimate a global mean field specifically for the “counterfactual”; i.e., we characterize the state of ocean temperatures during the TC season, using the non-TC profiles of Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS2"/>.</p>
      <p id="d1e2379">Using the non-TC profiles of Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS2"/>, we estimate, separately for each pressure level <inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> and for the vertically averaged temperature values, a global mean field through a variant of the Roemmich–Gilson climatology.  The Roemmich–Gilson climatology <xref ref-type="bibr" rid="bib1.bibx64" id="paren.51"/> was among the first to take advantage of the spatial coverage of the Argo array to characterize the mean state and annual cycle of temperature in the global upper ocean.  Specifically, they used a local linear regression model <xref ref-type="bibr" rid="bib1.bibx62" id="paren.52"/> to estimate the climatological mean temperature as a function of location <inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, pressure level <inline-formula><mml:math id="M89" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>, and day of year <inline-formula><mml:math id="M90" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>. This model is written down explicitly in <xref ref-type="bibr" rid="bib1.bibx36" id="text.53"/>, and our model, which differs marginally from that of <xref ref-type="bibr" rid="bib1.bibx64" id="text.54"/> in that we do not weight observations based upon the distance from the center point <inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> or use data from pressure levels <inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:msup><mml:mi>z</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>≠</mml:mo><mml:mi>z</mml:mi></mml:mrow></mml:math></inline-formula> to form estimates at pressure level <inline-formula><mml:math id="M93" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>, is elucidated in Eq. (<xref ref-type="disp-formula" rid="Ch1.E6"/>).</p>
      <p id="d1e2508">At each of these 20 pressure levels (or for the vertical average) and at each grid point of a mesh consisting of 180 equally spaced latitude points and 360 equally spaced longitude points, we fit
            <disp-formula id="Ch1.E6" content-type="numbered"><label>6</label><mml:math id="M94" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi>m</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mo>[</mml:mo><mml:mtext>first- and second-order terms in</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="0.25em" linebreak="nobreak"/><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mtext>and</mml:mtext><mml:mspace linebreak="nobreak" width="0.25em"/><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>]</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>+</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mn mathvariant="normal">6</mml:mn></mml:munderover><mml:msub><mml:mi mathvariant="italic">γ</mml:mi><mml:mi>k</mml:mi></mml:msub><mml:mi>sin⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">π</mml:mi><mml:mi>k</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>t</mml:mi><mml:mn mathvariant="normal">365.25</mml:mn></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced><mml:mo>+</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mn mathvariant="normal">6</mml:mn></mml:munderover><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mi>k</mml:mi></mml:msub><mml:mi>cos⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">π</mml:mi><mml:mi>k</mml:mi><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>t</mml:mi><mml:mn mathvariant="normal">365.25</mml:mn></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
          to the temperature observations, using all the non-TC profiles that fall within <inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">8</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (longitude–latitude) of the <inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> point at which our local regression function is centered. Since these models are fit separately over each window and depth, the estimation procedure can be trivially parallelized.</p>
      <p id="d1e2690">Let us denote by <inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:msub><mml:mi>m</mml:mi><mml:mrow><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>*</mml:mo></mml:msubsup></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> the mean function derived by fitting a local linear regression with data within a window centered at <inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> using Eq. (<xref ref-type="disp-formula" rid="Ch1.E6"/>) for a fixed depth <inline-formula><mml:math id="M99" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> or for the vertically averaged temperature values. Then, for each of the TC profiles (Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS2"/>), we produce the seasonal mean-adjusted temperature value in the following fashion. For a profile located at <inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mi>x</mml:mi><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> at time <inline-formula><mml:math id="M101" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> with temperature value <inline-formula><mml:math id="M102" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, obtain the closest grid point at which a local linear function was fitted:
            <disp-formula id="Ch1.E7" content-type="numbered"><label>7</label><mml:math id="M103" display="block"><mml:mrow><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi>arg⁡</mml:mi><mml:munder><mml:mo movablelimits="false">min⁡</mml:mo><mml:mrow><mml:msup><mml:mi>x</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:munder><mml:mo>‖</mml:mo><mml:msup><mml:mi>x</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>-</mml:mo><mml:mi>x</mml:mi><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          Then, at each pressure level <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula>, we obtain the mean-adjusted profiles:
            <disp-formula id="Ch1.E8" content-type="numbered"><label>8</label><mml:math id="M105" display="block"><mml:mrow><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mi>T</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mrow><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          For each temperature value <inline-formula><mml:math id="M106" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> in the TC profile set, we apply this mean adjustment to obtain the seasonally adjusted temperature value <inline-formula><mml:math id="M107" display="inline"><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:math></inline-formula>.  In particular, for a baseline–signal temperature pair <inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>signal</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, occurring at times <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, we obtain the seasonally adjusted temperature value pair <inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>. This gives rise to the <italic>seasonally adjusted temperature differences</italic>
            <disp-formula id="Ch1.E9" content-type="numbered"><label>9</label><mml:math id="M111" display="block"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          In terms of the high-level model Eq. (<xref ref-type="disp-formula" rid="Ch1.E1"/>), Eq. (<xref ref-type="disp-formula" rid="Ch1.E9"/>) in fact represents the temperature difference without the seasonal effect.  This may be seen through the decomposition:

                <disp-formula specific-use="align"><mml:math id="M112" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>y</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext></mml:msub></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mrow><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mrow><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mrow><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>-</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mrow><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:msub><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:mtext>temperature difference</mml:mtext><mml:mo>-</mml:mo><mml:mtext>seasonal effect</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>≜</mml:mo><mml:mtext>seasonally adjusted temperature difference</mml:mtext><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

            since the last two mean field terms only differ in terms of the contribution of the seasonal harmonics in Eq. (<xref ref-type="disp-formula" rid="Ch1.E6"/>).</p>
      <p id="d1e3391">Having accounted for the non-stochastic seasonal term, we may now directly analyze the reduced model.  This is informally described as
            <disp-formula id="Ch1.E10" content-type="numbered"><label>10</label><mml:math id="M113" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mtext>seasonally adjusted temperature difference</mml:mtext></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mo>=</mml:mo><mml:mtext>TC signal</mml:mtext><mml:mo>+</mml:mo><mml:mtext>ocean variability</mml:mtext></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
          and formally described, in terms of the ANOVA decomposition, as
            <disp-formula id="Ch1.E11" content-type="numbered"><label>11</label><mml:math id="M114" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
          where we have economized the notation from Eqs. (<xref ref-type="disp-formula" rid="Ch1.E2"/>) and (<xref ref-type="disp-formula" rid="Ch1.E3"/>) for brevity. The fitted seasonal means, at a depth of <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula>, are depicted in Fig. <xref ref-type="fig" rid="Ch1.F5"/>, with the full set of estimates across all pressure levels deferred to the Supplement.  The practical effect of this seasonal adjustment is illustrated in Sect. <xref ref-type="sec" rid="Ch1.S5.SS1"/>. The mean field adjustment is also performed for the non-TC profiles, yielding mean zero observations for the purposes of fitting the Gaussian process model of Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>.</p>

      <fig id="Ch1.F5" specific-use="star"><label>Figure 5</label><caption><p id="d1e3545">Panel <bold>(a)</bold> displays the seasonal effects fitted to the baseline–signal profile pairs, which show a general warming pattern during the TC season.  Because these seasonal effects are for pooled profile pairs from various times during the tropical cyclone season, the fitted effects may appear “noisy” as a function of latitude and longitude; as a function of ambient space and time, the mean fields are smooth, as expected for the local regression model (<xref ref-type="disp-formula" rid="Ch1.E6"/>). Panel <bold>(b)</bold> displays the <inline-formula><mml:math id="M116" display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula> parameters, which are the dominant term of the ocean variability estimates.  These fitted parameters reveal higher noise in regions corresponding to the equatorial currents off Central America, the Kuroshio and Oyashio currents off Japan, and the Gulf Stream current off Nova Scotia <xref ref-type="bibr" rid="bib1.bibx73" id="paren.55"/>. Estimates at TC profile locations and pressure level <inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> are displayed here, though the underlying model fits are performed on a global grid.  The full set of estimates across all pressure levels is deferred to the Supplement. </p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f05.png"/>

        </fig>

</sec>
<sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Variability estimates</title>
      <p id="d1e3593">Having obtained seasonally adjusted temperature differences at all pressure levels, we next detail our method for estimating the variability of these temperature differences.  Our general approach is an adaptation of the Gaussian process model proposed by <xref ref-type="bibr" rid="bib1.bibx36" id="text.56"/>, which handles the globally nonstationary covariance structure of the ocean using locally stationary Gaussian processes in a moving-window fashion <xref ref-type="bibr" rid="bib1.bibx27 bib1.bibx28" id="paren.57"/>. As in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>, we learn the parameters of our model using the <italic>non-TC</italic> profiles, in order to capture the local dynamics of the ocean without TC-induced effects.  However, once fitted, the model is used to provide information about ocean variability in the time and locations of the <italic>TC</italic> profiles.  This is a subtle, but important, distinction.</p>
      <p id="d1e3610">Our local Gaussian process models are fitted on an equally spaced grid of 180 latitude points and 360 longitude points, with a time window centered on September. This prioritizes fidelity towards ocean dynamics during the late summer and early fall months, when tropical cyclones are prevalent in the Northern Hemisphere, where the majority of the TC profile pairs are observed. As before, this analysis is carried out separately at each pressure level <inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> and for the vertically averaged temperature values.</p>
      <p id="d1e3633">In the following exposition, we follow the notation of <xref ref-type="bibr" rid="bib1.bibx36" id="text.58"/>, with slight adaptations to maintain consistency with Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>.  We use the term <italic>mean-adjusted</italic> interchangeably with <italic>seasonally adjusted</italic> to emphasize that the mean-adjusted temperature values are zero-mean (in the absence of a TC signal), as required by the Gaussian process model assumptions.</p>
      <p id="d1e3647">Let <inline-formula><mml:math id="M119" display="inline"><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover></mml:math></inline-formula> denote a mean-adjusted temperature value associated with a non-TC Argo profile at a fixed pressure level.  At each grid point <inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and fixed pressure level <inline-formula><mml:math id="M121" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>, we assume the following model for data points <inline-formula><mml:math id="M122" display="inline"><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:math></inline-formula> falling spatially within a window of <inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> of the grid point <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>*</mml:mo></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and temporally within the 3 months centered on September:
            <disp-formula id="Ch1.E12" content-type="numbered"><label>12</label><mml:math id="M125" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:msub><mml:mi>f</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mover><mml:mo movablelimits="false">∼</mml:mo><mml:mi mathvariant="normal">iid</mml:mi></mml:mover><mml:mi mathvariant="normal">GP</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>;</mml:mo><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>)</mml:mo><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
          where <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:math></inline-formula> indexes the years and <inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:mi>j</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> indexes the observations within the geospatial window for each year, <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is the spatial location associated with the mean-adjusted temperature value <inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is the time at which it was observed. The <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is a Gaussian nugget effect <xref ref-type="bibr" rid="bib1.bibx10" id="paren.59"/>, with <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mo>,</mml:mo><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mover><mml:mo movablelimits="false">∼</mml:mo><mml:mi mathvariant="normal">iid</mml:mi></mml:mover><mml:mi>N</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:mi mathvariant="normal">GP</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>;</mml:mo><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>)</mml:mo><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> denotes a zero-mean Gaussian process with a stationary covariance function with parameters <inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>.  The specific function used is an anisotropic geospatial covariance function
            <disp-formula id="Ch1.E13" content-type="numbered"><label>13</label><mml:math id="M135" display="block"><mml:mrow><mml:mi>k</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>;</mml:mo><mml:mi mathvariant="italic">θ</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi>exp⁡</mml:mi><mml:mo mathvariant="italic">{</mml:mo><mml:mo>-</mml:mo><mml:mi>d</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>)</mml:mo><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></disp-formula>
          with <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>, where
            <disp-formula id="Ch1.E14" content-type="numbered"><label>14</label><mml:math id="M137" display="block"><mml:mrow><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi>d</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="0.25em"/><mml:msqrt><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msqrt></mml:mrow></mml:mtd></mml:mtr></mml:mtable><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          with <inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. As in <xref ref-type="bibr" rid="bib1.bibx36" id="text.60"/>, these parameters are obtained through the method of maximum likelihood. As with the local mean field, the estimation of these parameters may be done in parallel across windows and pressure levels.</p>
      <p id="d1e4406">A few remarks are in order.  First, we note that the fitted parameters <inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> are all functions of <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, as we assume local stationarity to capture global nonstationarity.  At each location, the Gaussian process model used to estimate these parameters is centered on September, as most TCs in our database occur during this time period.  We then use these parameters to model the variance structure of profile pairs in all ocean basins; one could refine these estimates by fitting a model centered about every month and using the model whose central month is closest in time to each profile pair.  Finally, we observe that, by construction, the profile pairs from Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/> are assumed to have the same locations, i.e., <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mrow><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>.  Therefore, the covariance between the two profiles in a profile pair is given by the following reduced expressions. For a mean-adjusted temperature value pair <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> located at <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> with times <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, let <inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> be the nearest grid point, as in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>, and let <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> as in Eq. (<xref ref-type="disp-formula" rid="Ch1.E12"/>) be

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M152" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E15"><mml:mtd><mml:mtext>15</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">var</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="normal">var</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>)</mml:mo><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>;</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E16"><mml:mtd><mml:mtext>16</mml:mtext></mml:mtd><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>)</mml:mo><mml:mi>exp⁡</mml:mi><mml:mfenced open="{" close="}"><mml:mrow><mml:mo>-</mml:mo><mml:mfenced open="|" close="|"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>′</mml:mo></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced></mml:mrow></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d1e4863">To give an impression of the general variability in the global ocean, we plot the fitted <inline-formula><mml:math id="M153" display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula> parameters, for a fixed pressure level <inline-formula><mml:math id="M154" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula>, in Fig. <xref ref-type="fig" rid="Ch1.F5"/>. The parameters <inline-formula><mml:math id="M155" display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula> are plotted because <inline-formula><mml:math id="M156" display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula> is the dominant term in each variability estimate. The full set of figures depicting the fitted parameters and temperature difference variances, at each pressure level, is deferred to Sect. S5 of the Supplement.</p>
      <p id="d1e4901">We note that, even though only <inline-formula><mml:math id="M157" display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M158" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M159" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula> are used to evaluate the data covariances, the full model (Eqs. <xref ref-type="disp-formula" rid="Ch1.E12"/>, <xref ref-type="disp-formula" rid="Ch1.E13"/>, and <xref ref-type="disp-formula" rid="Ch1.E14"/>) must be fitted to estimate these parameters, and we require the full Argo database, including the non-TC profiles, to obtain these estimates.</p>
      <p id="d1e4936">For simplicity, we assume that two profiles which do not share the same baseline profile are uncorrelated. However, there are cases in which the lineage of a baseline profile includes multiple signal profiles.  In these cases, we account for the covariance between the profiles in the lineage.  We detail the case in which there are two signal profiles with mean-adjusted temperature values <inline-formula><mml:math id="M160" display="inline"><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>j</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula>, associated with a baseline profile with a mean-adjusted temperature value <inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula>, but the following framework is trivially extended to an arbitrary number of signal profiles in the lineage.  In practice, there will be no more than six signal profiles for a given baseline profile, due to the separation constraint introduced in Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>. Define the shorthand <inline-formula><mml:math id="M162" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>=</mml:mo><mml:msup><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>j</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>. We suppress the location <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>′</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> at which the parameters <inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="italic">σ</mml:mi></mml:mrow></mml:math></inline-formula> are evaluated, for brevity.  First, consider the covariance structure between the mean-adjusted temperature values of the three profiles in this lineage (one baseline <inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> and two signal <inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>j</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>,</mml:mo><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> values, occurring at times <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>k</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>):
            <disp-formula id="Ch1.E17" content-type="numbered"><label>17</label><mml:math id="M168" display="block"><mml:mrow><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi>exp⁡</mml:mi><mml:mo mathvariant="italic">{</mml:mo><mml:mo>-</mml:mo><mml:mo>|</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>|</mml:mo><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi>exp⁡</mml:mi><mml:mo mathvariant="italic">{</mml:mo><mml:mo>-</mml:mo><mml:mo>|</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>k</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>|</mml:mo><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi>exp⁡</mml:mi><mml:mo mathvariant="italic">{</mml:mo><mml:mo>-</mml:mo><mml:mo>|</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>|</mml:mo><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi>exp⁡</mml:mi><mml:mo mathvariant="italic">{</mml:mo><mml:mo>-</mml:mo><mml:mo>|</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>k</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>j</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>|</mml:mo><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi>exp⁡</mml:mi><mml:mo mathvariant="italic">{</mml:mo><mml:mo>-</mml:mo><mml:mo>|</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>k</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>|</mml:mo><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi>exp⁡</mml:mi><mml:mo mathvariant="italic">{</mml:mo><mml:mo>-</mml:mo><mml:mo>|</mml:mo><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mi>k</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">θ</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>|</mml:mo><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>
          The covariance matrix for the temperature differences may then be obtained as follows.  Define the mean-adjusted temperature differences

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M169" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E18"><mml:mtd><mml:mtext>18</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msup><mml:mi>y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>j</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E19"><mml:mtd><mml:mtext>19</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msup><mml:mi>y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            and the shorthand <inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>=</mml:mo><mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mi>y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi>y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>. Observe that <inline-formula><mml:math id="M171" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> is simply a linear transformation of <inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>:
            <disp-formula id="Ch1.E20" content-type="numbered"><label>20</label><mml:math id="M173" display="block"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>=</mml:mo><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mi>y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mi>y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>=</mml:mo><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mtext>baseline</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>j</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi>T</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mtext>signal</mml:mtext><mml:mrow><mml:mo>(</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          In general, the transformation matrix is a column of minus ones horizontally concatenated with the identity matrix.  It immediately follows that
            <disp-formula id="Ch1.E21" content-type="numbered"><label>21</label><mml:math id="M174" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold-italic">T</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>)</mml:mo><mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:mtd><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
          Recall that, because the temperature differences have been mean-adjusted, they are assumed to be zero-mean in the absence of a TC signal.  Therefore, when there is no TC signal, the distribution of <inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> is Gaussian with mean zero and covariance <inline-formula><mml:math id="M176" display="inline"><mml:mrow><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi>i</mml:mi><mml:mi>j</mml:mi><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, given in Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>). Mathematically speaking, we have accounted for the <inline-formula><mml:math id="M177" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> variability term of Eq. (<xref ref-type="disp-formula" rid="Ch1.E11"/>). This forms the basis for the estimation of <inline-formula><mml:math id="M178" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, our key quantity of interest, in Sect. <xref ref-type="sec" rid="Ch1.S4.SS5"/>.</p>
<sec id="Ch1.S4.SS4.SSS1">
  <label>4.4.1</label><title>Computational remarks</title>
      <p id="d1e6109">Denote by <inline-formula><mml:math id="M179" display="inline"><mml:mi mathvariant="bold-italic">y</mml:mi></mml:math></inline-formula> the full set of mean-adjusted temperature differences, ordered such that profiles in the same lineage are contiguous.  Its covariance, <inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>,  is a block diagonal matrix, with dense blocks corresponding to the lineages of distinct baseline profiles. This is important for two reasons.  First, a block diagonal matrix admits an efficient inverse; i.e., the inverse of a block diagonal matrix may be obtained by inverting the blocks individually.  Each of these blocks is no more than six entries wide, due to the separation constraint placed on profiles in Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>.  Second, the sparse structure of the block diagonal matrix may be exploited for efficient linear algebra operations <xref ref-type="bibr" rid="bib1.bibx76" id="paren.61"/> necessary to construct the thin-plate splines described in the sequel.</p>
</sec>
</sec>
<sec id="Ch1.S4.SS5">
  <label>4.5</label><title>Thin-plate splines</title>
      <p id="d1e6147">Having learned a model for the <inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">x</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> term of Eq. (<xref ref-type="disp-formula" rid="Ch1.E11"/>) through the Gaussian process model of Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>, we find ourselves properly positioned to estimate the TC-induced signal <inline-formula><mml:math id="M182" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. This we do with a thin-plate spline, a flexible nonparametric technique for fitting a surface in two dimensions, subject to a curvature penalty and observation weights.  Specifically, we smooth the seasonally adjusted temperature differences using a fixed-knot thin-plate spline smoother <xref ref-type="bibr" rid="bib1.bibx16 bib1.bibx77 bib1.bibx78 bib1.bibx25 bib1.bibx54 bib1.bibx82" id="paren.62"/>, in which we use the covariances estimated in Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/> to account for heteroskedasticity and cross-observation dependence <xref ref-type="bibr" rid="bib1.bibx61 bib1.bibx15 bib1.bibx54 bib1.bibx66" id="paren.63"/>. As with the local mean field model of Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/> and the Gaussian process model of Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>, this procedure is conducted separately at each pressure level <inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>∈</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula> and for the vertically averaged profiles.</p>
      <p id="d1e6256">We use a fixed-knot smoother (rather than placing a knot at every design point), chiefly in order to improve the conditioning of the linear operators.  As an additional, computational consideration, the use of fixed knots reduces the time and space complexity of the procedure. The fixed knots are equally spaced in the <inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">8</mml:mn><mml:mo>]</mml:mo><mml:mo>×</mml:mo><mml:mo>[</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> domain, in a grid formed from the cross-product of 33 points on the cross-track axis and 45 points on the time axis.  This yields a knot every 0.5 units along each dimension, including on the boundary.</p>
      <p id="d1e6296">The weighting of observations by the covariance between temperature differences is also noteworthy.  From a data model standpoint, it is known that we are using observations with drastically different noise levels <inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>baseline</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:mi>a</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>t</mml:mi><mml:mtext>signal</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, due to the effect of time and location.  Since we have estimated these noise levels in Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>, the covariance reweighting allows us to directly incorporate this information when estimating <inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> into the reduced model Eq. (<xref ref-type="disp-formula" rid="Ch1.E11"/>). From a practical standpoint, the covariance reweighting has a real effect in improving the signal-to-noise ratio, as shown in Fig. <xref ref-type="fig" rid="Ch1.F7"/> of Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/>. The full details of the thin-plate spline smoother, including its motivation and derivation, are given in Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>.</p>
      <p id="d1e6390">Let <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:mo>∈</mml:mo><mml:mi mathvariant="normal">Ω</mml:mi><mml:mo>⊂</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> be the design points and <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>y</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:mo>∈</mml:mo><mml:mi mathvariant="double-struck">R</mml:mi></mml:mrow></mml:math></inline-formula> be the corresponding responses.  We further fix a grid of regularly spaced knots, <inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>m</mml:mi></mml:msub><mml:mo>∈</mml:mo><mml:mi mathvariant="normal">Ω</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:mi>m</mml:mi><mml:mo>≪</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:math></inline-formula>, on which the basis functions of our smoother will be centered.  We use the shorthand notation <inline-formula><mml:math id="M192" display="inline"><mml:mrow><mml:mi mathvariant="bold">Ξ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi mathvariant="normal">…</mml:mi><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>n</mml:mi></mml:msub></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold">Ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msup><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi mathvariant="normal">…</mml:mi><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>n</mml:mi></mml:msub></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi mathvariant="normal">…</mml:mi><mml:msub><mml:mi>y</mml:mi><mml:mi>n</mml:mi></mml:msub></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>. Finally, we denote by <inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:mi mathvariant="bold">W</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>×</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> a weight matrix. Traditionally, this is the inverse covariance matrix of the observations <inline-formula><mml:math id="M196" display="inline"><mml:mi mathvariant="bold-italic">y</mml:mi></mml:math></inline-formula>.</p>
      <p id="d1e6624">In our usage, we take <inline-formula><mml:math id="M197" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>n</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> to be the <inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> coordinates of our Argo profile pairs, as obtained from Sect. <xref ref-type="sec" rid="Ch1.S4.SS2"/>; <inline-formula><mml:math id="M199" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>y</mml:mi><mml:mi>n</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> to be the corresponding seasonally adjusted temperature differences <inline-formula><mml:math id="M200" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> of those pairs, as obtained from Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>; and <inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:mi mathvariant="bold">W</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> to be the inverse matrix of covariances between those seasonally adjusted temperature differences, as obtained from Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>. Therefore, here <inline-formula><mml:math id="M202" display="inline"><mml:mrow><mml:mi mathvariant="normal">Ω</mml:mi><mml:mo>=</mml:mo><mml:mo>[</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">8</mml:mn><mml:mo>]</mml:mo><mml:mo>×</mml:mo><mml:mo>[</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>, where the first dimension (cross-track angle) is measured in degrees and the second dimension (time since TC passage) is measured in days.</p>
      <p id="d1e6766">The fixed-knot covariance-reweighted thin-plate spline problem is posed as follows.  We seek coefficients <inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">β</mml:mi></mml:mrow></mml:math></inline-formula> such that the following objective is minimized:
            <disp-formula id="Ch1.E22" content-type="numbered"><label>22</label><mml:math id="M204" display="block"><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold">L</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">β</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">W</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold">L</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">S</mml:mi><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          The first term in Eq. (<xref ref-type="disp-formula" rid="Ch1.E22"/>) is a generalized least-squares <xref ref-type="bibr" rid="bib1.bibx61 bib1.bibx15 bib1.bibx66" id="paren.64"/> data-fit criterion, and the second term is a roughness penalty <xref ref-type="bibr" rid="bib1.bibx52 bib1.bibx25 bib1.bibx82" id="paren.65"/>, with <inline-formula><mml:math id="M205" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>,</mml:mo><mml:mi mathvariant="bold">L</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="bold">S</mml:mi></mml:mrow></mml:math></inline-formula> defined in the sequel.  The parameter <inline-formula><mml:math id="M206" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> mediates the competing demands of the data fidelity and roughness penalty terms.</p>
<sec id="Ch1.S4.SS5.SSS1">
  <label>4.5.1</label><title>Construction of the smoother</title>
      <p id="d1e6904">The fixed-knot thin-plate spline smoother with covariance reweighting is constructed as follows.  Denote by <inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>×</mml:mo><mml:mi>m</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> the radial basis matrix with entries:
              <disp-formula id="Ch1.E23" content-type="numbered"><label>23</label><mml:math id="M208" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mfenced open="{" close=""><mml:mtable rowspacing="0.2ex" columnspacing="1em" class="cases" columnalign="left left" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mn mathvariant="normal">16</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>‖</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mi>log⁡</mml:mi><mml:mo>(</mml:mo><mml:mo>‖</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext> for </mml:mtext><mml:mo>‖</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mtext> otherwise. </mml:mtext></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
            Note that this consists of radial basis functions centered on the knots <inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, evaluated at the data points <inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>.  Further denote by <inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:mi mathvariant="bold">L</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mrow><mml:mn mathvariant="normal">3</mml:mn><mml:mo>×</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> the basis matrix corresponding to the linear and constant terms:

                  <disp-formula id="Ch1.E24" content-type="numbered"><label>24</label><mml:math id="M212" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="bold">L</mml:mi><mml:mo>=</mml:mo><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd><mml:mtd><mml:mi mathvariant="normal">⋯</mml:mi></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">ξ</mml:mi><mml:mn mathvariant="normal">11</mml:mn></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">ξ</mml:mi><mml:mn mathvariant="normal">21</mml:mn></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mi mathvariant="normal">⋯</mml:mi></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">ξ</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">ξ</mml:mi><mml:mn mathvariant="normal">12</mml:mn></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">ξ</mml:mi><mml:mn mathvariant="normal">22</mml:mn></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mi mathvariant="normal">⋯</mml:mi></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">ξ</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

            Finally, we define an additional “basis” matrix, where we evaluate the radial basis functions at the knot locations <inline-formula><mml:math id="M213" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>:
              <disp-formula id="Ch1.E25" content-type="numbered"><label>25</label><mml:math id="M214" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="bold">S</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mfenced open="{" close=""><mml:mtable class="cases" rowspacing="0.2ex" columnspacing="1em" columnalign="left left" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mn mathvariant="normal">16</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>‖</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mi>log⁡</mml:mi><mml:mo>(</mml:mo><mml:mo>‖</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext> for </mml:mtext><mml:mo>‖</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mtext> otherwise, </mml:mtext></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
            for the purpose of evaluating the roughness penalty in Eq. (<xref ref-type="disp-formula" rid="Ch1.E22"/>).</p>
      <p id="d1e7364">The coefficients minimizing Eq. (<xref ref-type="disp-formula" rid="Ch1.E22"/>) are given (see Appendix <xref ref-type="sec" rid="App1.Ch1.S1"/>) by

                  <disp-formula id="Ch1.E26" content-type="numbered"><label>26</label><mml:math id="M215" display="block"><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>=</mml:mo><mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">W</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mi mathvariant="bold">S</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">WL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="bold">LW</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">LWL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">W</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold">LW</mml:mi></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

            where <inline-formula><mml:math id="M216" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula> are the coefficients corresponding to the radial basis functions centered at the fixed knots and <inline-formula><mml:math id="M217" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula> are the coefficients corresponding to the constant and linear terms.  Estimates of the signal <inline-formula><mml:math id="M218" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> at a new set of locations <inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>N</mml:mi></mml:msub><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> may be obtained as follows:

                  <disp-formula id="Ch1.E27" content-type="numbered"><label>27</label><mml:math id="M220" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mover accent="true"><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">L</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

            where we denote <inline-formula><mml:math id="M221" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mrow><mml:mi>N</mml:mi><mml:mo>×</mml:mo><mml:mi>m</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> with entries
              <disp-formula id="Ch1.E28" content-type="numbered"><label>28</label><mml:math id="M222" display="block"><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace width="1em" linebreak="nobreak"/><mml:mfenced open="{" close=""><mml:mtable class="cases" rowspacing="0.2ex" columnspacing="1em" columnalign="left left" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mn mathvariant="normal">16</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>‖</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mi>log⁡</mml:mi><mml:mo>(</mml:mo><mml:mo>‖</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext> for </mml:mtext><mml:mo>‖</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mtext> otherwise, </mml:mtext></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
            and

                  <disp-formula id="Ch1.E29" content-type="numbered"><label>29</label><mml:math id="M223" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mover accent="true"><mml:mi mathvariant="bold">L</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd><mml:mtd><mml:mi mathvariant="normal">⋯</mml:mi></mml:mtd><mml:mtd><mml:mn mathvariant="normal">1</mml:mn></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">11</mml:mn></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">21</mml:mn></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mi mathvariant="normal">⋯</mml:mi></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mrow><mml:mi>N</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">12</mml:mn></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">22</mml:mn></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mi mathvariant="normal">⋯</mml:mi></mml:mtd><mml:mtd><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mrow><mml:mi>N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msub></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
</sec>
<sec id="Ch1.S4.SS5.SSS2">
  <label>4.5.2</label><title>Uncertainty quantification</title>
      <p id="d1e7893">Estimate variances and confidence intervals follow for the thin-plate spline estimates through the linearity of the smoother and the assumption of Gaussian noise. Denote by <inline-formula><mml:math id="M224" display="inline"><mml:mrow><mml:mi mathvariant="bold">Σ</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>×</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> the observation covariance matrix <inline-formula><mml:math id="M225" display="inline"><mml:mrow><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> from Eq. (<xref ref-type="disp-formula" rid="Ch1.E21"/>). The covariance matrix of the estimates is given by
              <disp-formula id="Ch1.E30" content-type="numbered"><label>30</label><mml:math id="M226" display="block"><mml:mrow><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mspace linebreak="nobreak" width="1em"/><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">L</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:msup><mml:mi mathvariant="bold">A</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">W</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold">LW</mml:mi></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mi mathvariant="bold">Σ</mml:mi><mml:msup><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">W</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold">LW</mml:mi></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">A</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">L</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
            where

                  <disp-formula id="Ch1.E31" content-type="numbered"><label>31</label><mml:math id="M227" display="block"><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="bold">A</mml:mi><mml:mo>=</mml:mo><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">W</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mi mathvariant="bold">S</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">WL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="bold">LW</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">LWL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

            The form of Eq. (<xref ref-type="disp-formula" rid="Ch1.E30"/>) follows from the usual quadratic form of covariances.</p>
      <p id="d1e8139">The matrix <inline-formula><mml:math id="M228" display="inline"><mml:mrow><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>)</mml:mo><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mrow><mml:mi>N</mml:mi><mml:mo>×</mml:mo><mml:mi>N</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> can be exorbitantly large (e.g., in our use case, we produce estimates on a grid with <inline-formula><mml:math id="M229" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">400</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mo>=</mml:mo><mml:mn mathvariant="normal">40</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">000</mml:mn></mml:mrow></mml:math></inline-formula> locations).  However, the construction of pointwise confidence intervals (i.e., <inline-formula><mml:math id="M230" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.96</mml:mn><mml:mo>⋅</mml:mo><mml:msqrt><mml:mrow><mml:mi mathvariant="normal">var</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>s</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:msqrt></mml:mrow></mml:math></inline-formula>, appealing to the Gaussian assumption to obtain 95 % coverage) only requires evaluation of the diagonal entries of <inline-formula><mml:math id="M231" display="inline"><mml:mrow><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, allowing for significant computational savings.  We note that, although the derived confidence intervals have widths matching the standard deviation of the estimates, the estimates <inline-formula><mml:math id="M232" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">s</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:math></inline-formula> themselves are biased due to shrinkage; therefore, the confidence intervals technically have biased centers.  It is thus possible that the intervals are misplaced, or are too short, in regions where <inline-formula><mml:math id="M233" display="inline"><mml:mrow><mml:mi>s</mml:mi><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> experiences high curvature.  We discuss alternatives for improvement in Sect. <xref ref-type="sec" rid="Ch1.S6"/>.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S5">
  <label>5</label><title>Estimated subsurface ocean thermal response to tropical cyclones</title>
<sec id="Ch1.S5.SS1">
  <label>5.1</label><title>Seasonal mean field adjustment</title>
      <p id="d1e8296">First, we detail the effect of the seasonal mean field adjustment, described in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/>, on the observed data.  Recall that the model (<xref ref-type="disp-formula" rid="Ch1.E6"/>) is fitted separately at each pressure level <inline-formula><mml:math id="M234" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula>.  In Fig. <xref ref-type="fig" rid="Ch1.F6"/>, we depict the effect of the seasonal adjustment on temperature differences at a pressure level of <inline-formula><mml:math id="M235" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> dbar.  The raw temperature differences are displayed in Fig. <xref ref-type="fig" rid="Ch1.F6"/>a, with the seasonal differences plotted in Fig. <xref ref-type="fig" rid="Ch1.F6"/>b and the seasonally adjusted temperature differences in Fig. <xref ref-type="fig" rid="Ch1.F6"/>c. The latter is the result of subtracting (b) from (a).  The individual differences are subject to an isotropic Gaussian kernel smoother with a bandwidth of <inline-formula><mml:math id="M236" display="inline"><mml:mrow><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula>, in order to more clearly display the data.</p>

      <fig id="Ch1.F6" specific-use="star"><label>Figure 6</label><caption><p id="d1e8358">Temperature differences in the <inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> coordinate system, at a depth of 40 m.  Panel <bold>(a)</bold> depicts the raw temperature differences, panel <bold>(b)</bold> shows the fitted mean field, and panel <bold>(c)</bold> shows the seasonally adjusted temperature differences. Here we include all profile pairs across all storm intensities and subject the data to a local constant smoother with an isotropic Gaussian kernel of bandwidth <inline-formula><mml:math id="M238" display="inline"><mml:mrow><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.2</mml:mn></mml:mrow></mml:math></inline-formula>. </p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f06.png"/>

        </fig>

      <p id="d1e8404">Figure <xref ref-type="fig" rid="Ch1.F6"/>b shows a warming effect that increases in magnitude as the time between the signal profile and TC passage increases.  This is consistent with the notion that the ocean experiences an overall warming effect at this depth during the TC season.  Note that because we are plotting the difference in the mean field evaluated at the times and locations of actual TC-associated profile pairs, we are only examining the mean field differences during the tropical cyclone season of each ocean basin analyzed.  Similar to Fig. <xref ref-type="fig" rid="Ch1.F5"/>, here the fitted seasonal effects are pooled over the entire TC season (and from different locations on Earth), which makes the fitted differences appear “noisy” in the TC-centric coordinate system, but the fitted mean fields are smooth as a function of ambient space and time, as expected based upon Eq. (<xref ref-type="disp-formula" rid="Ch1.E6"/>).</p>
      <p id="d1e8414">The warming effect in the seasonal mean field difference is a consistent feature in the pressure levels <inline-formula><mml:math id="M239" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> through <inline-formula><mml:math id="M240" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula>.  The pressure levels <inline-formula><mml:math id="M241" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>∈</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula> do not show a warming pattern and might even exhibit a slight cooling effect, while the pressure levels <inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">160</mml:mn></mml:mrow></mml:math></inline-formula> show only a small contribution of the seasonal signal to differences in paired profiles. These phenomena are consistent with the spatial structure of the seasonal cycle <xref ref-type="bibr" rid="bib1.bibx64" id="paren.66"/>. An adjustment for seasonal warming was not performed in a previous analysis of the ocean thermal response using paired Argo profiles <xref ref-type="bibr" rid="bib1.bibx6" id="paren.67"/>; as a result, some of the warming effects previously observed over longer time spans may in fact have been due to seasonal variation. The full sequence of results at all 20 pressure levels is deferred to Sect. S1 of the Supplement.</p>
</sec>
<sec id="Ch1.S5.SS2">
  <label>5.2</label><title>Ocean thermal response as a continuous function of time and cross-track distance</title>
      <p id="d1e8488">Having adjusted the temperature differences for the seasonal change using the model detailed in Sect. <xref ref-type="sec" rid="Ch1.S4.SS3"/> and accounted for the variability across profile pairs via Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>, we now apply the thin-plate spline smoother to the seasonally adjusted temperature differences to obtain our main scientific result: a characterization of the ocean thermal response to the passage of hurricane-strength tropical cyclones as a continuous function of time and cross-track distance.  This function is depicted for data from profile pairs associated with a hurricane-strength tropical cyclone (formally defined as having a sustained wind speed of at least 64 kn at <inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:msub><mml:mi>t</mml:mi><mml:mrow><mml:mi mathvariant="italic">π</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lon</mml:mi></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi mathvariant="normal">lat</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>, the time of TC passage) at a pressure level of <inline-formula><mml:math id="M244" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> dbar in Fig. <xref ref-type="fig" rid="Ch1.F7"/>.</p>
      <p id="d1e8537">The thin-plate splines are fitted separately at each depth <inline-formula><mml:math id="M245" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>.  Within each <inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>∈</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula>, we select a tuning parameter <inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>z</mml:mi><mml:mtext>cv</mml:mtext></mml:msubsup></mml:mrow></mml:math></inline-formula> guided by leave-one-out cross-validation (LOOCV). Importantly, we do not take the <inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mtext>min</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> that directly minimizes the LOOCV score.  Instead, we take the <inline-formula><mml:math id="M249" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>&lt;</mml:mo><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mtext>min</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> that produces a LOOCV error slightly (1 %) larger than the minimum LOOCV error.  This is done because heterogeneity in the thermal response signal causes a direct minimization of the LOOCV score to oversmooth the signal. The full details of the cross-validation procedure, including its mathematical statement, plots illustrating the estimated test error achieved by different <inline-formula><mml:math id="M250" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula>, and the chosen <inline-formula><mml:math id="M251" display="inline"><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>z</mml:mi><mml:mtext>cv</mml:mtext></mml:msubsup></mml:mrow></mml:math></inline-formula>, are deferred to Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>.</p>

      <fig id="Ch1.F7" specific-use="star"><label>Figure 7</label><caption><p id="d1e8651">Temperature differences for hurricane-strength profile pairs in the <inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> coordinate system, at a depth of 10 m, smoothed using thin-plate splines. Panel <bold>(a)</bold> depicts a thin-plate spline fit without any variance reweighting, panel <bold>(b)</bold> shows a thin-plate spline fit using block covariance reweighting, and panel <bold>(c)</bold> shows a pointwise <inline-formula><mml:math id="M253" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> test. We observe in panel <bold>(a)</bold> an unusual positive anomaly at cross-track <inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>≈</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula>, time difference <inline-formula><mml:math id="M255" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>∈</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">13</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, as well as unusually strong negative differences at time difference <inline-formula><mml:math id="M256" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>∈</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">18</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. Reweighting by the estimated block covariance in panel <bold>(b)</bold> attenuates these anomalies, and a pointwise hypothesis test in panel <bold>(c)</bold> masks these phenomena, indicating that they were due to ocean variability noise unrelated to TCs. </p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f07.png"/>

        </fig>

      <p id="d1e8762">The central Fig. <xref ref-type="fig" rid="Ch1.F7"/>b depicts the thin-plate spline fit, accounting for correlation between observations at a depth of <inline-formula><mml:math id="M257" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> dbar. Formally, the correlation adjustment is performed as follows.  We obtain an estimate for <inline-formula><mml:math id="M258" display="inline"><mml:mrow><mml:mi mathvariant="bold">Σ</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> through the Gaussian process model of Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/> and provide this to our covariance-reweighted thin-plate spline smoother of Sect. <xref ref-type="sec" rid="Ch1.S4.SS5"/> by setting <inline-formula><mml:math id="M259" display="inline"><mml:mrow><mml:mi mathvariant="bold">W</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mi mathvariant="bold">Σ</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>.  Recall that, by construction, <inline-formula><mml:math id="M260" display="inline"><mml:mi mathvariant="bold">Σ</mml:mi></mml:math></inline-formula> is a block diagonal matrix, with blocks no larger than six entries wide; therefore, <inline-formula><mml:math id="M261" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">Σ</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> may be efficiently computed.  For a very small number of temperature differences, the fitted variance is extremely small, on the order of <inline-formula><mml:math id="M262" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mi>exp⁡</mml:mi><mml:mo mathvariant="italic">{</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4.5</mml:mn><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula>.  We truncate the left tail and filter out these observations to prevent distortion of the fit.  This omits only 488 observation pairs out of 16 025.</p>
      <p id="d1e8859">In Fig. <xref ref-type="fig" rid="Ch1.F7"/>c, we perform a pointwise level <inline-formula><mml:math id="M263" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> hypothesis test on the thin-plate spline fit, using the variance estimates derived in Sect. <xref ref-type="sec" rid="Ch1.S4.SS5"/>.  The issues of performing a pointwise hypothesis test with <inline-formula><mml:math id="M264" display="inline"><mml:mrow><mml:mi>N</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">40</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mn mathvariant="normal">000</mml:mn></mml:mrow></mml:math></inline-formula> points are manifold, and we defer discussion of extensions through which we could make the significance test more sophisticated to Sect. <xref ref-type="sec" rid="Ch1.S6"/>.  Nonetheless, we see in Fig. <xref ref-type="fig" rid="Ch1.F7"/>c a simple fact: that the estimated cooling effect induced by tropical cyclones is of a greater magnitude than the variability of the estimates.  Moreover, this cooling effect persists for a sustained period of time, stretching into 2 weeks following the tropical cyclone passage.  We also see a rightward bias in the cooling effect, which may be attributed to the storm's direction of rotation.<fn id="Ch1.Footn3"><p id="d1e8898">Due to the Coriolis effect, TCs in the Northern Hemisphere will induce a greater cooling effect on the right side of the cross-track angle parameterization than on the left side, due to the combined effects of forward movement and counterclockwise wind rotation. TCs in the Southern Hemisphere, which experience clockwise wind rotation, will induce a greater cooling effect on the left side. In order to display this effect in a consistent manner across the hemispheres, we flip the sign of the cross-track angle for TCs in the Southern Hemisphere when producing Figs. <xref ref-type="fig" rid="Ch1.F6"/>–<xref ref-type="fig" rid="Ch1.F12"/>.</p></fn></p>
      <p id="d1e8905">To illustrate the importance of estimating the correlations between observations for the final thin-plate spline fit, we plot in Fig. <xref ref-type="fig" rid="Ch1.F7"/>a the surface estimated by applying a thin-plate spline smoother without accounting for the variability estimates from Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>, i.e., setting <inline-formula><mml:math id="M265" display="inline"><mml:mi mathvariant="bold">W</mml:mi></mml:math></inline-formula> to be the identity matrix.  These estimates are tuned with the same LOOCV procedure.  We observe a sustained warm anomaly at <inline-formula><mml:math id="M266" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>≈</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:math></inline-formula> that is present over several days.  Concerningly, this warm anomaly is comparable in magnitude with the expected cooling effect observed at <inline-formula><mml:math id="M267" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>≈</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. We also see negative anomalies which occur late in the recovery stage, in <inline-formula><mml:math id="M268" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>∈</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">18</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. When viewed in context with Fig. <xref ref-type="fig" rid="Ch1.F7"/>b and c, we see that adjusting for the correlations reduces the impact of some outlying observations causing these anomalous effects in the naive estimate, and the pointwise hypothesis test masks away the effects almost entirely.</p>
      <p id="d1e8968">An additional phenomenon of scientific interest that may be observed in the thin-plate spline fits is that of <italic>vertical mixing</italic>, in which the warm water close to the ocean surface is forced downwards by the force of the tropical cyclone <xref ref-type="bibr" rid="bib1.bibx50" id="paren.68"/>.  Although the net change in heat content incidental to the passage of a tropical cyclone is negative, vertical mixing may register as a warming effect at shallower subsurface ocean depths. This phenomenon may be observed in Fig. <xref ref-type="fig" rid="Ch1.F8"/>. In Fig. <xref ref-type="fig" rid="Ch1.F8"/>a, we recall the smoothed temperature differences at depth <inline-formula><mml:math id="M269" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula>, in which a dramatic cooling effect is depicted.  At the deeper pressure level of <inline-formula><mml:math id="M270" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">60</mml:mn></mml:mrow></mml:math></inline-formula>, however, we see a mixture of both cooling and warming; i.e., a net increase in temperature is observed at <inline-formula><mml:math id="M271" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>∈</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">4</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M272" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>∈</mml:mo><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">6</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>.  Finally, we see in Fig. <xref ref-type="fig" rid="Ch1.F8"/>c that, by <inline-formula><mml:math id="M273" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula>, the warming effect has disappeared, while the cooling effect remains.  We note that the characterization of this warming effect as a continuous function of both cross-track angle and time since TC passage is made possible by our methodological framework and was not possible in the previous literature <xref ref-type="bibr" rid="bib1.bibx6" id="paren.69"/>.</p>

      <fig id="Ch1.F8" specific-use="star"><label>Figure 8</label><caption><p id="d1e9065">Temperature differences for hurricane-strength profile pairs, smoothed using thin-plate splines, at depths of <inline-formula><mml:math id="M274" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">60</mml:mn></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M275" display="inline"><mml:mn mathvariant="normal">150</mml:mn></mml:math></inline-formula>, respectively. Vertical mixing gives rise to a warming phenomenon on the right side of the tropical cyclone at the intermediate depths.  All plots are masked with a pointwise level <inline-formula><mml:math id="M276" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> hypothesis test. </p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f08.png"/>

        </fig>

      <p id="d1e9110">The discussion of vertical mixing is further developed in Sect. <xref ref-type="sec" rid="Ch1.S5.SS3"/>, <xref ref-type="sec" rid="Ch1.S5.SS4"/>, and <xref ref-type="sec" rid="Ch1.S5.SS5"/>. The full set of covariance-reweighted thin-plate spline fits, at all pressure levels <inline-formula><mml:math id="M277" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula>, is deferred to Sect. S2 of the Supplement.</p>
</sec>
<sec id="Ch1.S5.SS3">
  <label>5.3</label><title>Depth–time parameterization</title>
      <p id="d1e9147">Of additional scientific interest is the characterization of the ocean thermal response for a fixed cross-track angle, as a function of time and pressure. To facilitate this analysis, we collect the 20 thin-plate spline fits for pressure levels <inline-formula><mml:math id="M278" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> from Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/> and “marginalize” them along three sets of cross-track angles: <inline-formula><mml:math id="M279" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>,</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M280" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M281" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>. These three plots are presented in Fig. <xref ref-type="fig" rid="Ch1.F9"/>. In each of the marginalized plots, we subset the covariance-reweighted thin-plate spline fits from Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/> to each of the cross-track bins and average out the cross-track component.  Variance estimates follow immediately (owing to the linearity of averaging) and are used to construct a pointwise <inline-formula><mml:math id="M282" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> hypothesis test.  We display these marginalized estimates in Fig. <xref ref-type="fig" rid="Ch1.F9"/>.</p>

      <fig id="Ch1.F9" specific-use="star"><label>Figure 9</label><caption><p id="d1e9265">The covariance-reweighted thin-plate spline fits (hurricane-strength TCs) of Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/> are averaged along three sets of cross-track angles <inline-formula><mml:math id="M283" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula> corresponding to the left (<inline-formula><mml:math id="M284" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>,</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>), center (<inline-formula><mml:math id="M285" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>), and right (<inline-formula><mml:math id="M286" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>) relative to the TC's forward movement. The resulting estimates are plotted as a function of time since TC passage <inline-formula><mml:math id="M287" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> and pressure level <inline-formula><mml:math id="M288" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>.  A pointwise <inline-formula><mml:math id="M289" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> hypothesis test is performed and used to mask areas where we fail to reject the null hypothesis. </p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f09.png"/>

        </fig>

      <p id="d1e9382">The cross-track angle bins, centered on <inline-formula><mml:math id="M290" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>, were chosen to emphasize three particular oceanographic and meteorological phenomena. First, the bin centered on <inline-formula><mml:math id="M291" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> in Fig. <xref ref-type="fig" rid="Ch1.F9"/>b depicts the ocean cooling induced by the passage of tropical cyclones.  Of particular note is the fact that this cooling appears to persist for a sustained period of time, specifically up to at least 2 weeks. As one may expect, the cooling effect diminishes as pressure <inline-formula><mml:math id="M292" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> or time since TC passage <inline-formula><mml:math id="M293" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> increases. Second, the bin centered at <inline-formula><mml:math id="M294" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>=</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> in Fig. <xref ref-type="fig" rid="Ch1.F9"/>c depicts the phenomenon of vertical mixing previously discussed in Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/>. As TC winds mix surface water downward, we observe warming at depths between <inline-formula><mml:math id="M295" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M296" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula>. Past <inline-formula><mml:math id="M297" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula>, we find that the warming effect has faded away.  Finally, we contrast the strong warming effect observed in Fig. <xref ref-type="fig" rid="Ch1.F9"/>c with the lack of warming (at a statistically significant level) in Fig. <xref ref-type="fig" rid="Ch1.F9"/>a, which depicts the bin centered on <inline-formula><mml:math id="M298" display="inline"><mml:mrow><mml:mi>d</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>. This reflects the fact that the effect of vertical mixing is asymmetric, due to the counterclockwise rotation of tropical cyclones in the Northern Hemisphere.</p>
</sec>
<sec id="Ch1.S5.SS4">
  <label>5.4</label><title>Depth–cross-track parameterization</title>
      <p id="d1e9519">We further demonstrate that our continuous-time methodology captures the temporally binned results of <xref ref-type="bibr" rid="bib1.bibx6" id="text.70"/>, whose profile pairing process we used in this paper.  To introduce temporal binning, we take the covariance-reweighted thin-plate spline estimates from Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/> across pressure levels <inline-formula><mml:math id="M299" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> and split them into two bins, <inline-formula><mml:math id="M300" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M301" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, termed the “forced” stage and “recovery” stage by <xref ref-type="bibr" rid="bib1.bibx6" id="text.71"/>. For each of the two bins, we perform the same averaging process as in Sect. <xref ref-type="sec" rid="Ch1.S5.SS3"/> to marginalize the estimates over the <inline-formula><mml:math id="M302" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula> axis and obtain <inline-formula><mml:math id="M303" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> pointwise significance tests. We present the resulting fits as functions of cross-track angle <inline-formula><mml:math id="M304" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula> and pressure level <inline-formula><mml:math id="M305" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> in Fig. <xref ref-type="fig" rid="Ch1.F10"/>.</p>

      <fig id="Ch1.F10" specific-use="star"><label>Figure 10</label><caption><p id="d1e9637">The covariance-reweighted thin-plate spline fits (hurricane-strength TCs) of Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/> are averaged along two sets of time since TC passage <inline-formula><mml:math id="M306" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula>, and the resulting estimates are plotted as a function of pressure level <inline-formula><mml:math id="M307" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> and cross-track angle <inline-formula><mml:math id="M308" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula>. Panel <bold>a</bold> averages over <inline-formula><mml:math id="M309" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> d, and panel <bold>b</bold> averages over <inline-formula><mml:math id="M310" display="inline"><mml:mrow><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> d. A pointwise <inline-formula><mml:math id="M311" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> hypothesis test is performed and used to mask areas where we fail to reject the null hypothesis. </p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f10.png"/>

        </fig>

      <p id="d1e9734">Several noteworthy phenomena are present in Fig. <xref ref-type="fig" rid="Ch1.F10"/>. In Fig. <xref ref-type="fig" rid="Ch1.F10"/>a, we observe both the primary cooling effect and the secondary warming effect in the subsurface on the right side of the storm due to vertical mixing, as discussed in Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/> and <xref ref-type="sec" rid="Ch1.S5.SS3"/>.  We also observe a sustained cooling effect in Fig. <xref ref-type="fig" rid="Ch1.F10"/>b during the period called the “recovery” stage in <xref ref-type="bibr" rid="bib1.bibx6" id="text.72"/>. While the primary cooling effect observed in the two time periods is qualitatively consistent with the results presented by <xref ref-type="bibr" rid="bib1.bibx6" id="text.73"/>, their results also show a strong warming effect on both sides of the storm during the recovery stage (Fig. 10 in <xref ref-type="bibr" rid="bib1.bibx6" id="altparen.74"/>), which is absent from our estimate. Overall, it appears that the recovery stage estimate in <xref ref-type="bibr" rid="bib1.bibx6" id="text.75"/> is “warm biased” in comparison to our estimate. We attribute the difference to our methodology's accounting of the seasonal mean field and variability estimates, which, when used in the thin-plate spline estimate, attenuate the influence of outlying observations dominated by non-TC oceanographic variability as illustrated in Fig. <xref ref-type="fig" rid="Ch1.F7"/>.</p>
</sec>
<sec id="Ch1.S5.SS5">
  <label>5.5</label><title>Isosurfaces of the thin-plate spline estimates</title>
      <p id="d1e9771">To provide a holistic understanding of the ocean thermal response structure as a function of depth, cross-track distance, and time since TC passage, we compute isosurface plots of the thin-plate spline estimates from Sect. <xref ref-type="sec" rid="Ch1.S4.SS5"/>.  Two sets of isosurfaces are computed: one set for regions of negative temperature differences and one set for regions of positive temperature differences.  These are shaded blue and red, respectively, in Fig. <xref ref-type="fig" rid="Ch1.F11"/>.</p>

      <fig id="Ch1.F11" specific-use="star"><label>Figure 11</label><caption><p id="d1e9780">The <inline-formula><mml:math id="M312" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>0.3 °C isosurfaces of the thin-plate spline fits, displayed at three different camera perspectives. Negative temperature differences are shaded in blue, and positive temperature differences are shaded in red. </p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f11.png"/>

        </fig>

      <p id="d1e9796">For each set of isosurfaces, we first mask the thin-plate spline estimates that fail to reject a pointwise level <inline-formula><mml:math id="M313" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula> hypothesis test, using the variance estimates from Sect. <xref ref-type="sec" rid="Ch1.S4.SS5.SSS2"/>. We then apply the marching cubes algorithm <xref ref-type="bibr" rid="bib1.bibx45 bib1.bibx39 bib1.bibx76" id="paren.76"/> to identify positive and negative isosurfaces of magnitude 0.3 °C.  The positive isosurface is colored in red and the negative isosurface in blue.</p>
      <p id="d1e9817">We observe in Fig. <xref ref-type="fig" rid="Ch1.F11"/> a large blue mass corresponding to the TC-related ocean cooling.  This blue mass is restricted to a relatively small range of cross-track angles near the center but persists in time.  This behavior is consistent with Fig. <xref ref-type="fig" rid="Ch1.F9"/>.  We also observe a smaller red mass, corresponding to the local warming effect associated with the vertical mixing induced by the TC, as previously seen in Fig. <xref ref-type="fig" rid="Ch1.F8"/> and discussed in Sect. <xref ref-type="sec" rid="Ch1.S5.SS3"/>.  Consistent with Figs. <xref ref-type="fig" rid="Ch1.F8"/>, <xref ref-type="fig" rid="Ch1.F9"/>, and <xref ref-type="fig" rid="Ch1.F10"/>, this warming effect is only observed on the positive side of the cross-track distance axis.  The right panel of Fig. <xref ref-type="fig" rid="Ch1.F11"/> mirrors Fig. <xref ref-type="fig" rid="Ch1.F10"/>a almost exactly, the only differences being the viewing angle and filtering of very small values inherent in finding nonzero isosurfaces.</p>
</sec>
<sec id="Ch1.S5.SS6">
  <label>5.6</label><title>Vertically averaged temperature differences</title>
      <p id="d1e9847">Here, we present the results from the vertically averaged analysis, in which we estimate the full model Eqs. (<xref ref-type="disp-formula" rid="Ch1.E2"/>) and (<xref ref-type="disp-formula" rid="Ch1.E3"/>) using the vertically averaged temperature values from Sect. <xref ref-type="sec" rid="Ch1.S4.SS1.SSS1"/>. As before, we choose the smoothing parameter <inline-formula><mml:math id="M314" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mtext>cv</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> guided by leave-one-out cross-validation, with the full details deferred to Appendix <xref ref-type="sec" rid="App1.Ch1.S2"/>.</p>

      <fig id="Ch1.F12" specific-use="star"><label>Figure 12</label><caption><p id="d1e9874">Results from the vertically averaged analysis. The three panels here (corresponding to seasonally adjusted temperature differences, a block covariance-reweighted thin-plate spline fit, and a pointwise <inline-formula><mml:math id="M315" display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> test) are analogous to Figs. <xref ref-type="fig" rid="Ch1.F6"/>c, <xref ref-type="fig" rid="Ch1.F7"/>b, and <xref ref-type="fig" rid="Ch1.F7"/>c, respectively.</p></caption>
          <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f12.png"/>

        </fig>

      <p id="d1e9901">The seasonally adjusted temperature differences and accompanying thin-plate spline fits are presented in Fig. <xref ref-type="fig" rid="Ch1.F12"/>. In Fig. <xref ref-type="fig" rid="Ch1.F12"/>a, we only show data from pairs associated with hurricane-strength TCs, in contrast to Fig. <xref ref-type="fig" rid="Ch1.F6"/>, which shows data from all profile pairs regardless of storm intensity.  The restriction to hurricane-strength profile pairs here is to provide a fairer comparison with the thin-plate spline estimates of Fig. <xref ref-type="fig" rid="Ch1.F12"/>b and c, which use the hurricane-strength subset (as in Fig. <xref ref-type="fig" rid="Ch1.F7"/>).</p>
      <p id="d1e9915">The thin-plate spline fit in Fig. <xref ref-type="fig" rid="Ch1.F12"/>b conforms to our intuition; we observe a cooling signal, as in Fig. <xref ref-type="fig" rid="Ch1.F7"/>b, but its magnitude is dampened by the vertical averaging procedure.  More importantly, Fig. <xref ref-type="fig" rid="Ch1.F12"/>c does not show any warming effect indicative of vertical mixing. This is in contrast to Figs. <xref ref-type="fig" rid="Ch1.F7"/>b, <xref ref-type="fig" rid="Ch1.F9"/>c, and <xref ref-type="fig" rid="Ch1.F10"/>a, which treat depth as a separate dimension of analysis.  From an oceanographic and meteorological perspective, this suggests that the vertical mixing-induced warming effect is local in depth; it only appears at some pressure levels, because it is caused by the forcing of warm surface waters downward by the TC.  Once we integrate vertically, the local warming effect is cancelled out by a cooling effect near the surface and is no longer visible.  From a statistical perspective, this underscores the importance of treating depth as a separate axis of analysis, using the vertical resolution of Argo observations.</p>
</sec>
</sec>
<sec id="Ch1.S6" sec-type="conclusions">
  <label>6</label><title>Discussion</title>
      <p id="d1e9940">In this paper, we have introduced a comprehensive methodological framework based upon an ANOVA-type decomposition for analyzing tropical-cyclone-induced ocean temperature changes.  This framework includes a pairing process for identifying reference observations, the construction of an annual mean field to account for seasonal shift at the timescales of the measured differences, and estimation of observation variability and computationally efficient smoothers that leverage these estimates of variability.</p>
      <p id="d1e9943">Aside from methodological contributions, we have presented several results of scientific interest.  In particular, our framework improves upon the past scientific literature by modeling the tropical-cyclone-induced ocean thermal response as a function of time, pressure, and cross-track angle, in which both the time and cross-track angle components are treated continuously.  Through this modeling, we are able to produce fine-grained characterizations of the ocean thermal response at a number of different depths, and we observe differing ocean thermal responses as a function of depth.  Specifically, we recover the primary effect of surface cooling and the secondary effect of subsurface warming due to vertical mixing.  By computing isosurfaces on our thin-plate spline fits, we are able to characterize these two phenomena as a function of the depth, time, and cross-track distance dimensions.  Finally, the seasonal mean field component of our methodological framework reveals a nontrivial warming of the ocean near its surface during the TC season, which we estimate and account for in our analysis.</p>
      <p id="d1e9946">Of course, this is not the full scientific story.  The ocean response to the passage of TCs is complex, including contributions from upwelling near the storm center, downwelling in the outer regions, and mixed-layer entrainment <xref ref-type="bibr" rid="bib1.bibx17 bib1.bibx41" id="paren.77"/>; horizontal currents <xref ref-type="bibr" rid="bib1.bibx12" id="paren.78"/>; and air–sea exchanges of heat <xref ref-type="bibr" rid="bib1.bibx20 bib1.bibx21" id="paren.79"/>. The initial stratification in a region is also important for understanding the relevant processes. Nonetheless, the statistical methodology presented in this paper provides an important new framework through which TC-induced temperature changes in the upper ocean may be studied as a function of depth, distance from the TC track center, and time since TC passage.</p>
      <p id="d1e9958">Although our methodological framework was developed with ocean thermal response in mind, the techniques discussed are of general interest.  An immediate generalization is the use of the exact same methodology for Argo salinity profiles in lieu of temperature profiles. One may expect that, due to rainfall, evaporation, and mixing, the passage of a tropical cyclone would be registered in the salinity profiles of the affected ocean region.  Similar analyses for other transient atmospheric phenomena, including atmospheric rivers and southern ocean storm systems, are also possible.  One could additionally regress these signals on latitude, storm strength, pre-storm ocean state, ocean basin, and other covariates to better model and understand the underlying scientific phenomena. Regression on latitude may be particularly relevant with regard to the ongoing scientific discourse on the large-scale climatological effects of tropical cyclones <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx35 bib1.bibx31 bib1.bibx32 bib1.bibx29" id="paren.80"/>.</p>
      <p id="d1e9965">The present methodological framework also admits a number of possible refinements.  From a statistical standpoint, one could improve upon our model by considering each temperature profile to be a functional observation and modeling the depth component continuously rather than interpolating to a sequence of depths and fitting separate models at each depth level.  This would potentially allow one to also infer changes in mixed-layer depth and thermocline stability.  Our model could also potentially be improved by replacing the thin-plate spline smoother with a spline smoother with a spatially varying smoothing parameter (e.g., <xref ref-type="bibr" rid="bib1.bibx65" id="altparen.81"/>) or a nonlinear, multiresolution smoother that naturally accounts for heterogeneity in the TC-induced signal (e.g., <xref ref-type="bibr" rid="bib1.bibx13" id="altparen.82"/>).</p>
      <p id="d1e9974">The pointwise hypothesis tests used in Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/> have a number of limitations, including a lack of correction for multiple testing and smoothing bias.  These provide natural opportunities for improvement; however, the problem of amending the pointwise hypothesis tests could be subsumed by instead considering field significance (e.g., <xref ref-type="bibr" rid="bib1.bibx43 bib1.bibx80 bib1.bibx14" id="altparen.83"/>). Because the primary goal of this paper is to introduce a general methodological framework of which the final hypothesis tests are just one component, we defer these improvements to future work.</p>
      <p id="d1e9982">An additional extension of statistical and scientific interest involves carefully accounting for float drift.  In this paper, we require the baseline and signal profiles to be within <inline-formula><mml:math id="M316" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.2</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> of each other and then assume that they share a single location in the analysis, admitting a useful simplification of the fitted covariance function.  An extension would involve relaxing the strict closeness requirement of the paired profiles and removing the assumption that the paired profiles are in the same location by more carefully modeling their covariance, taking into account their relative spatial locations.  This requires a nontrivial generalization of the Gaussian process model of <xref ref-type="bibr" rid="bib1.bibx36" id="text.84"/> but would provide the benefit of increasing the number of available pairs with which to fit the model.  An early approach in this vein is that of <xref ref-type="bibr" rid="bib1.bibx55" id="text.85"/>.  Yet another extension would be the consideration of parametric models for the TC wake <xref ref-type="bibr" rid="bib1.bibx29" id="paren.86"/>.  Finally, the fusion of microwave sea surface temperature (mSST; <xref ref-type="bibr" rid="bib1.bibx24 bib1.bibx79" id="altparen.87"/>) observations with Argo profiles might provide an opportunity to produce estimates of the individual-storm level rather than in terms of the global aggregates, as was done here. mSST observations are very dense in latitude and longitude but lack the depth penetration provided by the Argo profiles, which are relatively sparse in latitude and longitude.  Therefore, mSST and Argo are naturally complementary in the information provided.</p>
</sec>

      
      </body>
    <back><app-group>

<app id="App1.Ch1.S1">
  <label>Appendix A</label><title>Derivation of the thin-plate spline estimator</title>
      <p id="d1e10018">In this section, provided for completeness, we motivate and derive the thin-plate spline estimator <xref ref-type="bibr" rid="bib1.bibx16 bib1.bibx77 bib1.bibx78 bib1.bibx25 bib1.bibx81" id="paren.88"/> used in Sect. <xref ref-type="sec" rid="Ch1.S4.SS5"/> for completeness. First, we review the natural thin-plate spline smoother in Sect. <xref ref-type="sec" rid="App1.Ch1.S1.SS1"/>. Sections <xref ref-type="sec" rid="App1.Ch1.S1.SS2"/> and <xref ref-type="sec" rid="App1.Ch1.S1.SS3"/> then describe versions of the thin-plate spline when subject to covariance reweighting (via generalized least squares; <xref ref-type="bibr" rid="bib1.bibx61 bib1.bibx15 bib1.bibx54 bib1.bibx66" id="altparen.89"/>) and when its basis functions are constructed from a fixed-knot set <xref ref-type="bibr" rid="bib1.bibx77 bib1.bibx82" id="paren.90"/>.</p>
<sec id="App1.Ch1.S1.SS1">
  <label>A1</label><title>The natural thin-plate spline smoother</title>
      <p id="d1e10046">Suppose we observe data <inline-formula><mml:math id="M317" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:mo>∈</mml:mo><mml:mi mathvariant="normal">Ω</mml:mi><mml:mo>⊂</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> with responses <inline-formula><mml:math id="M318" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>y</mml:mi><mml:mi>n</mml:mi></mml:msub><mml:mo>∈</mml:mo><mml:mi mathvariant="double-struck">R</mml:mi></mml:mrow></mml:math></inline-formula>.  Define the shorthand notation <inline-formula><mml:math id="M319" display="inline"><mml:mrow><mml:mi mathvariant="bold">Ξ</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi mathvariant="normal">…</mml:mi><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>n</mml:mi></mml:msub></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M320" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>=</mml:mo><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi mathvariant="normal">…</mml:mi><mml:msub><mml:mi>y</mml:mi><mml:mi>n</mml:mi></mml:msub></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e10165">The natural thin-plate spline problem provides a smooth function <inline-formula><mml:math id="M321" display="inline"><mml:mi>g</mml:mi></mml:math></inline-formula> such that <inline-formula><mml:math id="M322" display="inline"><mml:mrow><mml:mi>g</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>≈</mml:mo><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math id="M323" display="inline"><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:math></inline-formula>.  The “closeness” of <inline-formula><mml:math id="M324" display="inline"><mml:mrow><mml:mi>g</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M325" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is enforced through squared error, while a penalty on the curvature of <inline-formula><mml:math id="M326" display="inline"><mml:mi>g</mml:mi></mml:math></inline-formula> discourages roughness.  Formally, we define the roughness penalty:
            <disp-formula id="App1.Ch1.S1.E32" content-type="numbered"><label>A1</label><mml:math id="M327" display="block"><mml:mrow><mml:mi>J</mml:mi><mml:mo>(</mml:mo><mml:mi>g</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:munder><mml:mo movablelimits="false">∬</mml:mo><mml:mrow><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:munder><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mo>∂</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi>g</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msubsup><mml:mi mathvariant="italic">ξ</mml:mi><mml:mn mathvariant="normal">1</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mo>∂</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi>g</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msub><mml:mi mathvariant="italic">ξ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:msub><mml:mi mathvariant="italic">ξ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msup><mml:mo>∂</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi>g</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:msubsup><mml:mi mathvariant="italic">ξ</mml:mi><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi mathvariant="normal">d</mml:mi><mml:msub><mml:mi mathvariant="italic">ξ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi mathvariant="normal">d</mml:mi><mml:msub><mml:mi mathvariant="italic">ξ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          We then define an objective in which the regularization parameter <inline-formula><mml:math id="M328" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> mediates the competing demands of the squared error and roughness penalty terms:
            <disp-formula id="App1.Ch1.S1.E33" content-type="numbered"><label>A2</label><mml:math id="M329" display="block"><mml:mrow><mml:mi>S</mml:mi><mml:mo>(</mml:mo><mml:mi>g</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:munderover><mml:mo>(</mml:mo><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mi>g</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:msup><mml:mo>)</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mi>J</mml:mi><mml:mo>(</mml:mo><mml:mi>g</mml:mi><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          Let us define the basis matrix <inline-formula><mml:math id="M330" display="inline"><mml:mrow><mml:mi mathvariant="bold">R</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>×</mml:mo><mml:mi>n</mml:mi></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, with entries
            <disp-formula id="App1.Ch1.S1.E34" content-type="numbered"><label>A3</label><mml:math id="M331" display="block"><mml:mrow><mml:mtable rowspacing="0.2ex" class="split" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="bold">R</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>j</mml:mi></mml:mrow></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mfenced open="{" close=""><mml:mtable rowspacing="0.2ex" columnspacing="1em" class="cases" columnalign="left left" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="false"><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mn mathvariant="normal">16</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mrow></mml:mfrac></mml:mstyle></mml:mstyle><mml:mo>‖</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mi>log⁡</mml:mi><mml:mo>(</mml:mo><mml:mo>‖</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mtext> for </mml:mtext><mml:mo>‖</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>j</mml:mi></mml:msub><mml:msubsup><mml:mo>‖</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mn mathvariant="normal">0</mml:mn></mml:mtd><mml:mtd><mml:mtext> otherwise.</mml:mtext></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mrow></mml:math></disp-formula>
          One may recognize this as analogous to the basis matrix Eq. (<xref ref-type="disp-formula" rid="Ch1.E23"/>) from Sect. <xref ref-type="sec" rid="Ch1.S4.SS5"/>, where we have replaced the fixed knots with a knot at each sample point.  Further recall the basis of linear and constant terms in Eq. (<xref ref-type="disp-formula" rid="Ch1.E24"/>).</p>
      <p id="d1e10616">It is possible <xref ref-type="bibr" rid="bib1.bibx16 bib1.bibx52 bib1.bibx77 bib1.bibx78 bib1.bibx25" id="paren.91"/> to rewrite Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E33"/>) as
            <disp-formula id="App1.Ch1.S1.E35" content-type="numbered"><label>A4</label><mml:math id="M332" display="block"><mml:mrow><mml:mi>S</mml:mi><mml:mo>(</mml:mo><mml:mi>g</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">R</mml:mi><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold">L</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">β</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">R</mml:mi><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold">L</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M333" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mi>n</mml:mi></mml:msup><mml:mo>,</mml:mo><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> uniquely define the thin-plate spline <inline-formula><mml:math id="M334" display="inline"><mml:mi>g</mml:mi></mml:math></inline-formula>.  Expanding Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E35"/>), we obtain
            <disp-formula id="App1.Ch1.S1.E36" content-type="numbered"><label>A5</label><mml:math id="M335" display="block"><mml:mtable class="split" rowspacing="0.2ex" displaystyle="true" columnalign="right left"><mml:mtr><mml:mtd><mml:mrow><mml:mi>S</mml:mi><mml:mo>(</mml:mo><mml:mi>g</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mo>=</mml:mo><mml:msup><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mi mathvariant="bold-italic">δ</mml:mi></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold-italic">β</mml:mi></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mi mathvariant="bold">R</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">RL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold">LR</mml:mi></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">LL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mi mathvariant="bold-italic">δ</mml:mi></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold-italic">β</mml:mi></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mi mathvariant="bold-italic">δ</mml:mi></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold-italic">β</mml:mi></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>⊤</mml:mo></mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mi mathvariant="bold">R</mml:mi></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold">L</mml:mi></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>+</mml:mo><mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>
          Therefore, first-order optimality and convexity imply that Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E34"/>) is minimized by <inline-formula><mml:math id="M336" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>,</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula> such that
            <disp-formula id="App1.Ch1.S1.E37" content-type="numbered"><label>A6</label><mml:math id="M337" display="block"><mml:mrow><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>=</mml:mo><mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mi mathvariant="bold">R</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">RL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold">LR</mml:mi></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">LL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mi mathvariant="bold">R</mml:mi></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold">L</mml:mi></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
</sec>
<sec id="App1.Ch1.S1.SS2">
  <label>A2</label><title>The covariance-reweighted thin-plate spline smoother</title>
      <p id="d1e10965">Due to the correlated and heteroskedastic nature of the temperature differences in this paper, we desire a version of the thin-plate spline smoother Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E37"/>) that properly accounts for these effects.  This is done via generalized least squares <xref ref-type="bibr" rid="bib1.bibx61 bib1.bibx15 bib1.bibx54 bib1.bibx66" id="paren.92"/>, which poses the objective function
            <disp-formula id="App1.Ch1.S1.E38" content-type="numbered"><label>A7</label><mml:math id="M338" display="block"><mml:mrow><mml:mi>S</mml:mi><mml:mo>(</mml:mo><mml:mi>g</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">R</mml:mi><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold">L</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">β</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">W</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="bold">R</mml:mi><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold">L</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">R</mml:mi><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M339" display="inline"><mml:mrow><mml:mi mathvariant="bold">W</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">cov</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> is the inverse of the covariance matrix between the seasonally adjusted temperature differences, previously estimated in Sect. <xref ref-type="sec" rid="Ch1.S4.SS4"/>. In the simplest case of diagonal <inline-formula><mml:math id="M340" display="inline"><mml:mi mathvariant="bold">W</mml:mi></mml:math></inline-formula>, Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E38"/>) may be interpreted as inversely weighting the contribution of each observation to the objective by the magnitude of its variance.</p>
      <p id="d1e11089">Carrying through an analogous quadratic expansion and minimization, we find that Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E38"/>) is minimized by <inline-formula><mml:math id="M341" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>,</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula> such that
            <disp-formula id="App1.Ch1.S1.E39" content-type="numbered"><label>A8</label><mml:math id="M342" display="block"><mml:mrow><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>=</mml:mo><mml:msup><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="bold">RWR</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mi mathvariant="bold">R</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">RWL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold">LWR</mml:mi></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">LWL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mi mathvariant="bold">RW</mml:mi></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold">LW</mml:mi></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
</sec>
<sec id="App1.Ch1.S1.SS3">
  <label>A3</label><title>Adaptation to fixed knots</title>
      <p id="d1e11194">Finally, we detail the adaptation of the covariance-reweighted thin-plate spline smoother to the fixed-knot regime <xref ref-type="bibr" rid="bib1.bibx77 bib1.bibx78 bib1.bibx66 bib1.bibx82" id="paren.93"/>. Suppose a set of fixed knots <inline-formula><mml:math id="M343" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi>m</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, with <inline-formula><mml:math id="M344" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:math></inline-formula> as defined in Eq. (<xref ref-type="disp-formula" rid="Ch1.E23"/>) and <inline-formula><mml:math id="M345" display="inline"><mml:mi mathvariant="bold">S</mml:mi></mml:math></inline-formula> as defined in Eq. (<xref ref-type="disp-formula" rid="Ch1.E25"/>). The thin-plate spline smoothing problem, restricted to this set of knots, is given <xref ref-type="bibr" rid="bib1.bibx82" id="paren.94"/> by
            <disp-formula id="App1.Ch1.S1.E40" content-type="numbered"><label>A9</label><mml:math id="M346" display="block"><mml:mrow><mml:mi>S</mml:mi><mml:mo>(</mml:mo><mml:mi>g</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold">L</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">β</mml:mi><mml:msup><mml:mo>)</mml:mo><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">W</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="bold">L</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo>)</mml:mo><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:msup><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">S</mml:mi><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M347" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mi>m</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M348" display="inline"><mml:mrow><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo>∈</mml:mo><mml:msup><mml:mi mathvariant="double-struck">R</mml:mi><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>.  Carrying out the same calculations, we find that Eq. (<xref ref-type="disp-formula" rid="App1.Ch1.S1.E40"/>) is minimized by <inline-formula><mml:math id="M349" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>,</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula> such that
            <disp-formula id="App1.Ch1.S1.E41" content-type="numbered"><label>A10</label><mml:math id="M350" display="block"><mml:mrow><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold-italic">δ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mover accent="true"><mml:mi mathvariant="bold-italic">β</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mo>=</mml:mo><mml:msup><mml:mfenced open="[" close="]"><mml:mtable class="matrix" columnalign="center center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">W</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>+</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mi mathvariant="bold">S</mml:mi></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup><mml:msup><mml:mi mathvariant="bold">WL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:mi mathvariant="bold">LW</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:msup><mml:mi mathvariant="bold">LWL</mml:mi><mml:mo>⊤</mml:mo></mml:msup></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mfenced close="]" open="["><mml:mtable class="matrix" columnalign="center" framespacing="0em"><mml:mtr><mml:mtd><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="bold">R</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>⊤</mml:mo></mml:msup><mml:mi mathvariant="bold">W</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mi mathvariant="bold">LW</mml:mi></mml:mtd></mml:mtr></mml:mtable></mml:mfenced><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
</sec>
</app>

<app id="App1.Ch1.S2">
  <label>Appendix B</label><title>Leave-one-out cross-validation</title>
      <p id="d1e11509">In this section, we fully describe the procedure used to select the <inline-formula><mml:math id="M351" display="inline"><mml:mrow><mml:msubsup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>z</mml:mi><mml:mtext>cv</mml:mtext></mml:msubsup></mml:mrow></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S5.SS2"/> and the <inline-formula><mml:math id="M352" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mtext>cv</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> in Sect. <xref ref-type="sec" rid="Ch1.S5.SS6"/>.  Informally, we calculate the leave-one-out cross-validation (LOOCV) scores for a fine grid of <inline-formula><mml:math id="M353" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> and then choose the <inline-formula><mml:math id="M354" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> corresponding to the most complex model whose LOOCV score is within 1 % of the minimum LOOCV. This procedure is motivated by the fact that the signal being estimated is heterogeneous, and a naive minimization of the LOOCV error was empirically found to result in an over-regularized model.  This will be made formal in the sequel.</p>
      <p id="d1e11561">The leave-one-out cross-validation score under weighted smoothing <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx25" id="paren.95"/> is given by
          <disp-formula id="App1.Ch1.S2.E42" content-type="numbered"><label>B1</label><mml:math id="M355" display="block"><mml:mrow><mml:mi mathvariant="normal">CV</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:munderover><mml:msub><mml:mi>w</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msup><mml:mover accent="true"><mml:mi>g</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mrow><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>;</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math id="M356" display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi>i</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is an observation-specific weight (typically the inverse variance) and <inline-formula><mml:math id="M357" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi>g</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mrow><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>;</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is the thin-plate spline, fitted to all observations <italic>except</italic> observation <inline-formula><mml:math id="M358" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>, using regularization parameter <inline-formula><mml:math id="M359" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula>, evaluated on observation <inline-formula><mml:math id="M360" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>.</p>
      <p id="d1e11712">As the thin-plate spline is a linear smoother, we may trivially access the leave-one-out residuals through the “hat matrix trick” <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx25" id="paren.96"/>
          <disp-formula id="App1.Ch1.S2.E43" content-type="numbered"><label>B2</label><mml:math id="M361" display="block"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msup><mml:mover accent="true"><mml:mi>g</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mrow><mml:mo>(</mml:mo><mml:mo>-</mml:mo><mml:mi>i</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>;</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi>g</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>;</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msubsup><mml:mi>h</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math id="M362" display="inline"><mml:mrow><mml:msubsup><mml:mi>h</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> is the <inline-formula><mml:math id="M363" display="inline"><mml:mi>i</mml:mi></mml:math></inline-formula>th diagonal entry of the hat matrix of <inline-formula><mml:math id="M364" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>g</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">ξ</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>;</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, i.e., the matrix <inline-formula><mml:math id="M365" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> that satisfies <inline-formula><mml:math id="M366" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="bold">H</mml:mi><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msup><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mi>g</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mo>(</mml:mo><mml:mi mathvariant="bold">Ξ</mml:mi><mml:mo>;</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mover accent="true"><mml:mi mathvariant="bold-italic">y</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mrow></mml:math></inline-formula>. Combining Eqs. (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E42"/>) and (<xref ref-type="disp-formula" rid="App1.Ch1.S2.E43"/>), we obtain the LOOCV score
          <disp-formula id="App1.Ch1.S2.E44" content-type="numbered"><label>B3</label><mml:math id="M367" display="block"><mml:mrow><mml:mtext>CV</mml:mtext><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:munderover><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mi mathvariant="normal">var</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi>y</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>i</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msubsup><mml:mi>h</mml:mi><mml:mrow><mml:mi>i</mml:mi><mml:mi>i</mml:mi></mml:mrow><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where we have taken <inline-formula><mml:math id="M368" display="inline"><mml:mrow><mml:msub><mml:mi>w</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mi mathvariant="normal">var</mml:mi><mml:mo>(</mml:mo><mml:msub><mml:mi>y</mml:mi><mml:mi>i</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula>, as in Sect. <xref ref-type="sec" rid="Ch1.S4.SS5"/>.</p>

      <fig id="App1.Ch1.S2.F13" specific-use="star"><label>Figure B1</label><caption><p id="d1e12049">Panel <bold>(a)</bold> shows that the minimizing <inline-formula><mml:math id="M369" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mtext>min</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula>, for each depth, tends to lie in an extremely shallow basin, within which a wide range of <inline-formula><mml:math id="M370" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> achieves a comparable estimated test error (NB: the vertical axis is at the logarithmic scale).  By choosing a <inline-formula><mml:math id="M371" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1.01</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> associated with a 1 % increase in the test error, we obtain fits that more faithfully illustrate the TC-induced thermal response.  Panel <bold>(b)</bold> reports the chosen <inline-formula><mml:math id="M372" display="inline"><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula> for each pressure level <inline-formula><mml:math id="M373" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> and for the vertically averaged temperature differences.  Fits using <inline-formula><mml:math id="M374" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">500</mml:mn></mml:mrow></mml:math></inline-formula> are ignored as they essentially only fit the linear (unpenalized) terms of the thin-plate spline.</p></caption>
        <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f13.png"/>

      </fig>

      <p id="d1e12129">The LOOCV errors for <inline-formula><mml:math id="M375" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mo>∈</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mn mathvariant="normal">10</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mn mathvariant="normal">200</mml:mn><mml:mo mathvariant="italic">}</mml:mo></mml:mrow></mml:math></inline-formula> fits and for the vertically averaged fit are illustrated in Fig. <xref ref-type="fig" rid="App1.Ch1.S2.F13"/>, with the minimizing <inline-formula><mml:math id="M376" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mtext>min</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> marked with crosses in Fig. B1a.  However, as we alluded to earlier, we do not use <inline-formula><mml:math id="M377" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mtext>min</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula>; rather, we take
          <disp-formula id="App1.Ch1.S2.E45" content-type="numbered"><label>B4</label><mml:math id="M378" display="block"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mtext>cv</mml:mtext></mml:msup><mml:mo>=</mml:mo><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mtext>1.01</mml:mtext></mml:msup><mml:mo>=</mml:mo><mml:mo movablelimits="false">min⁡</mml:mo><mml:mo mathvariant="italic">{</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>:</mml:mo><mml:mi mathvariant="normal">CV</mml:mi><mml:mo>(</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>)</mml:mo><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">1.01</mml:mn><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">CV</mml:mi><mml:mo>(</mml:mo><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mtext>min</mml:mtext></mml:msup><mml:mo>)</mml:mo><mml:mo mathvariant="italic">}</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        which we mark with stars in Fig. <xref ref-type="fig" rid="App1.Ch1.S2.F13"/>a. This corresponds to taking the most complex model whose LOOCV error is within 1 % of the minimized LOOCV error. We favor a more complex model than the one obtained by naively minimizing the LOOCV error because the signal being estimated is heterogeneous; i.e., it obeys different levels of smoothness in different regions of the domain. The <inline-formula><mml:math id="M379" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mtext>min</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M380" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1.01</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> are given as a function of depth in Fig. <xref ref-type="fig" rid="App1.Ch1.S2.F13"/>b.</p>

      <fig id="App1.Ch1.S2.F14" specific-use="star"><label>Figure B2</label><caption><p id="d1e12292">LOOCV curves, computed separately using errors within a “thermal response signal” region <inline-formula><mml:math id="M381" display="inline"><mml:mi mathvariant="script">S</mml:mi></mml:math></inline-formula> and errors within <inline-formula><mml:math id="M382" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="script">S</mml:mi><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>.  The observations within <inline-formula><mml:math id="M383" display="inline"><mml:mi mathvariant="script">S</mml:mi></mml:math></inline-formula> consistently favor a more complex model; the fact that no single <inline-formula><mml:math id="M384" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> is uniformly optimal over the entire domain highlights the heterogeneity of the signal being estimated.  We compromise by allowing a more complex model that achieves an LOOCV error within 1 % of the minimum. </p></caption>
        <graphic xlink:href="https://ascmo.copernicus.org/articles/10/69/2024/ascmo-10-69-2024-f14.png"/>

      </fig>

      <p id="d1e12333">Specifically, the signal is particularly large in magnitude for cross-track angles (<inline-formula><mml:math id="M385" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula>) close to zero and within the first 2 weeks after TC passage (<inline-formula><mml:math id="M386" display="inline"><mml:mi mathvariant="italic">τ</mml:mi></mml:math></inline-formula>); however, outside of this region, the signal drops off and is close to zero in curvature.  For illustrative purposes, we formally define this “thermal response signal” region as <inline-formula><mml:math id="M387" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi>d</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">τ</mml:mi><mml:mo>)</mml:mo><mml:mo>∈</mml:mo><mml:mo>[</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mo>,</mml:mo><mml:mo>+</mml:mo><mml:mn mathvariant="normal">3</mml:mn><mml:mo>]</mml:mo><mml:mo>×</mml:mo><mml:mo>[</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">12</mml:mn><mml:mo>]</mml:mo><mml:mo>=</mml:mo><mml:mo>:</mml:mo><mml:mi mathvariant="script">S</mml:mi></mml:mrow></mml:math></inline-formula>.  We then compute two LOOCV error curves for each depth <inline-formula><mml:math id="M388" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula>, one using data from <inline-formula><mml:math id="M389" display="inline"><mml:mi mathvariant="script">S</mml:mi></mml:math></inline-formula> and the other using data from <inline-formula><mml:math id="M390" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="script">S</mml:mi><mml:mi mathvariant="normal">c</mml:mi></mml:msup><mml:mo>=</mml:mo><mml:mi mathvariant="normal">Ω</mml:mi><mml:mo>∖</mml:mo><mml:mi mathvariant="script">S</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e12435">Indeed, we see in Fig. <xref ref-type="fig" rid="App1.Ch1.S2.F14"/> that the LOOCV curves implied by the errors corresponding to observations in each of these two regions produce very different minimizers, with the observations within the thermal response signal region favoring a more complex model and observations outside the signal region favoring a more regularized model.  The choice of <inline-formula><mml:math id="M391" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mtext>cv</mml:mtext></mml:msup><mml:mo>=</mml:mo><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1.01</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> represents a compromise between the natural impulse to minimize the LOOCV error and the recognition that naive minimization will yield an over-regularized model, as was empirically confirmed to be the case when visually inspecting the fits. Importantly, the <inline-formula><mml:math id="M392" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi mathvariant="script">S</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>, tuned using only the observations falling in <inline-formula><mml:math id="M393" display="inline"><mml:mi mathvariant="script">S</mml:mi></mml:math></inline-formula>, are roughly consistent with our slightly under-smoothed <inline-formula><mml:math id="M394" display="inline"><mml:mrow><mml:msup><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mtext>cv</mml:mtext></mml:msup></mml:mrow></mml:math></inline-formula>, as can be seen by comparing Figs. <xref ref-type="fig" rid="App1.Ch1.S2.F13"/> and <xref ref-type="fig" rid="App1.Ch1.S2.F14"/>.</p>
</app>
  </app-group><notes notes-type="codeavailability"><title>Code availability</title>

      <p id="d1e12508">Code implementing our methodology may be found at <uri>https://github.com/huisaddison/tc-ocean-methods</uri> (last access: 30 December 2022) and Zenodo (<ext-link xlink:href="https://doi.org/10.5281/zenodo.11882987" ext-link-type="DOI">10.5281/zenodo.11882987</ext-link>, <xref ref-type="bibr" rid="bib1.bibx30" id="altparen.97"/>).</p>
  </notes><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e12523">There are two principal sources of data: Argo float data and tropical cyclone best-track data. The Argo float data were collected and made freely available by the International Argo Program and the national programs that contribute to it (<ext-link xlink:href="https://doi.org/10.17882/42182" ext-link-type="DOI">10.17882/42182</ext-link>, <xref ref-type="bibr" rid="bib1.bibx1" id="altparen.98"/>). The Argo Program is part of the Global Ocean Observing System. The tropical cyclone best-track data are available from the <xref ref-type="bibr" rid="bib1.bibx53" id="text.99"/> website (<uri>https://www.nhc.noaa.gov/data/#hurdat</uri>).</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e12538">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/ascmo-10-69-2024-supplement" xlink:title="pdf">https://doi.org/10.5194/ascmo-10-69-2024-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e12547">AJH, MK, and ABL developed the methodology with domain knowledge and conceptualization from DG and KMW.  AJH performed the formal analysis, visualization, and writing, with feedback from all the authors. The software was developed by AJH, extending the original software by MK.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e12553">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e12559">Publisher’s note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. While Copernicus Publications makes every effort to include appropriate place names, the final responsibility lies with the authors.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e12566">We thank the associate editor and the two referees, whose feedback improved the quality and clarity of our paper. The authors thank members of the CMU Statistical Methods for the Physical Sciences (STAMPS) Research Group and the SAMSI/CMU Statistical Oceanography Working Group for insightful comments and feedback during this work.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e12571">Addison J. Hu acknowledges support from the NSF GRFP (award no. DGE175016) and NSF DMS (award no. 1520786). Mikael Kuusela was supported by the NOAA (award no. NA21OAR4310258). Ann B. Lee was supported by the NSF DMS (award no. 2053804). Donata Giglio was supported by NSF EarthCube (award no. 1928305), the NOAA (award no. NA21OAR4310261), and NASA (award no. 80NSSC19K0059). Kimberly M. Wood was supported by the NSF (award no. AGS-2011812).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e12577">This paper was edited by Christopher Paciorek and reviewed by two anonymous referees.</p>
  </notes><ref-list>
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